Difference between revisions of "GlueX Offline Software"

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'''News:'''
 
'''News:'''
−
* February 7, 2020: [https://mailman.jlab.org/pipermail/halld-offline/2020-February/003902.html Deprecating DIST in favor of HALLD_VERSIONS for version.xml files]
+
* July 19, 2022: [[GlueX_Software_Meeting,_July_18,_2022#Minutes|Minutes of the July 18th Software Meeting]] are available
−
* February 5, 2020: [https://mailman.jlab.org/pipermail/halld-offline/2020-February/003901.html New version set: version_4.15.0.xml]
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* July 12, 2022: [https://halldweb.jlab.org/halld_versions/version_5.8.0.xml New version set: 5.8.0].
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* February 4, 2020: [[GlueX Software Meeting, February 4, 2020#Minutes|Minutes of the February 4 Software Meeting are available]].
+
* June 7, 2022: [[GlueX_Software_Meeting,_June_6,_2022#Minutes|Minutes of the June 6th Software Meeting]] are available
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* February 4, 2020: [[HDGeant4_Meeting,_January_28,_2020#Minutes|Minutes of the January 28 HDGeant4 Meeting are available]].
+
* May 23, 2022" [https://halldweb.jlab.org/wiki/index.php/GlueX_Tutorial_2022 GlueX Software and Analysis Tutorial 2022]
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* January 22, 2020: [[GlueX Software Meeting, January 21, 2020#Minutes|Minutes of the January 21 Software Meeting are available]].
+
* May 19, 2022: [https://mailman.jlab.org/pipermail/halld-offline/2022-May/008816.html New version set: 5.7.1].
 
* [[Offline Software News Archive|Previous news items...]]
 
* [[Offline Software News Archive|Previous news items...]]
 
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'''Quick Links:'''
 
'''Quick Links:'''
 +
* [https://scicomptest.jlab.org/scicomp/tapeFile Listing of files missing from the tape library]
 
* [[GlueX Offline FAQ|Frequently Asked Questions]]
 
* [[GlueX Offline FAQ|Frequently Asked Questions]]
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* [[GlueX_Offline_FAQ#Where_do_I_find_version_set_files.3F|Version Sets Files]]
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* [[Offline HOWTO List|HOWTO List]]
 +
* [[GlueX_Offline_FAQ#Where_do_I_find_version_set_files.3F|Version Set Files]]
 
* [https://github.com/orgs/JeffersonLab/teams/gluex/repositories Repositories on GitHub]
 
* [https://github.com/orgs/JeffersonLab/teams/gluex/repositories Repositories on GitHub]
 
* [[GlueX Offline Software Meetings]]
 
* [[GlueX Offline Software Meetings]]
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===Shell Environment Set-Up===
 
===Shell Environment Set-Up===
  
−
* [[Setting Up the GlueX Environment]]
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* [https://halldweb.jlab.org/docs/build_scripts_web/node6.html#SECTION00062400000000000000 Simple Environment Set Up]
  
 
===Building GlueX Software===
 
===Building GlueX Software===
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* [[GlueX Software on Oasis]]
 
* [[GlueX Software on Oasis]]
 +
* [https://github.com/JeffersonLab/hd_singularity Package for Building Singularity Containers]
 +
* [[GlueX Containers Meetings]]
 +
* [[HOWTO use the GlueX Singularity Container]]
  
 
==Software Documentation==
 
==Software Documentation==
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Documentation for software packages specific to GlueX or to JLab.
 
Documentation for software packages specific to GlueX or to JLab.
 +
* A brief overview of the GlueX-specific software can be found [[ Software | here ]]
 +
* Best practices in writing code for the HallD/GlueX software environment check out this link of [[Coding Conventions| '''''HallD/GlueX Coding Conventions''''']]
 +
* A convenient way to enhance the impact of comments inside the code is to use [https://halldweb.jlab.org/talks/2021/usedoxy.pdf '''''Doxygen''''']. The hooks and infrastructures are already implemented for the packages ''halld_recon'' and ''halld_sim''.
 +
* [[Documentation Initiative]]
  
 
====Software Packages====
 
====Software Packages====
  
−
* [http://amptools.sourceforge.net/index.php/Main_Page AmpTools]: Amplitude analysis package (aka partial wave analysis)
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* [https://github.com/mashephe/AmpTools AmpTools]: Amplitude analysis package (aka partial wave analysis)
 
* [[Calibration Database|CCDB]]: Calibration Database
 
* [[Calibration Database|CCDB]]: Calibration Database
 
** [[Policy on CCDB Variations for Reconstructing Simulated Data]]
 
** [[Policy on CCDB Variations for Reconstructing Simulated Data]]
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**[https://halldweb.jlab.org/gluex_sim/Dashboard.html '''Active Sample Dashboard''']
 
**[https://halldweb.jlab.org/gluex_sim/Dashboard.html '''Active Sample Dashboard''']
 
**[https://halldweb.jlab.org/gluex_sim/SubmitSim.html '''MC Submission Form''']
 
**[https://halldweb.jlab.org/gluex_sim/SubmitSim.html '''MC Submission Form''']
 +
* [https://pypwa.jlab.org/index.html PyPWA:] [https://pypwa.readthedocs.io/ Python-based Partial Wave Analysis Toolkit]
 
* [https://github.com/JeffersonLab/rcdb/wiki RCDB]: Run Conditions Database
 
* [https://github.com/JeffersonLab/rcdb/wiki RCDB]: Run Conditions Database
 
** [https://halldweb.jlab.org/rcdb/ Web Interface]
 
** [https://halldweb.jlab.org/rcdb/ Web Interface]
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===JLab===
 
===JLab===
−
* [https://halldweb.jlab.org/disk_management/halld_status.html Hall D Offline System Status Plots]
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* [https://halldweb.jlab.org/disk_management/halld_status.html Hall D Offline System Status Plots] [[File:User jobs 0 thumb.png|link=https://halldweb.jlab.org/disk_management/halld_status.html]]
 
* [[Computing Services and Servers|Hall D and JLab Servers]]: Web servers, database servers, etc.
 
* [[Computing Services and Servers|Hall D and JLab Servers]]: Web servers, database servers, etc.
 
* [https://cc.jlab.org/ Computer Center]
 
* [https://cc.jlab.org/ Computer Center]
−
* [https://scicomp.jlab.org/scicomp/ Scientific Computing]
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* [https://scicomptest.jlab.org/scicomp/ Scientific Computing]
 
** [https://scicomp.jlab.org/scicomp/#/auger/jobs Farm Job Status] Auger job status from SciComp
 
** [https://scicomp.jlab.org/scicomp/#/auger/jobs Farm Job Status] Auger job status from SciComp
 
*** [https://halldweb.jlab.org/cgi-bin/jproj_status.pl jproj Job Status] Status of jobs using the jproj system
 
*** [https://halldweb.jlab.org/cgi-bin/jproj_status.pl jproj Job Status] Status of jobs using the jproj system
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** [https://mailman.jlab.org/pipermail/halld-offline/2017-June/002827.html Using the Grid with Containers]
 
** [https://mailman.jlab.org/pipermail/halld-offline/2017-June/002827.html Using the Grid with Containers]
 
** [[Using the Grid]]
 
** [[Using the Grid]]
 +
** [[Updating Oasis for the GlueX VO]]
 
** [https://halldweb.jlab.org/talks/2011-2Q/gridmake-6-2011.ppt Gridmake]
 
** [https://halldweb.jlab.org/talks/2011-2Q/gridmake-6-2011.ppt Gridmake]
 +
 +
===Off-Site Computing Resources===
 +
 +
* [[Off-site Computing Resources]]: Status of applications, current and past allocations
  
 
==Software Management==
 
==Software Management==
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* [https://data.jlab.org/drupal/?q=system/files/Offline%20Plan%20FY10.pdf JLab Offline Computing Plan, FY2010]
 
* [https://data.jlab.org/drupal/?q=system/files/Offline%20Plan%20FY10.pdf JLab Offline Computing Plan, FY2010]
 
* [[Role of the Software Coordinator]]
 
* [[Role of the Software Coordinator]]
 +
 +
=== Containers ===
 +
 +
* [[GlueX and Containers]]: an overview of the use of containers in GlueX
  
 
==Meetings and Reviews==
 
==Meetings and Reviews==
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* [[GlueX Containers Meetings]]
 
* [[GlueX Containers Meetings]]
 
* [[Software and Computing Reviews]]
 
* [[Software and Computing Reviews]]
−
* [[Other Reviews]]
+
* [[Geometries for 2008 DC Review]]
  
 
==Communication and Help==
 
==Communication and Help==
  
−
* [https://groups.google.com/forum/#!forum/gluex-software Google Group for GlueX Software]
 
−
**[[GlueX-Related Google Groups|Help on GlueX-related Google Groups]]
 
−
* [https://mailman.jlab.org/pipermail/halld-offline/2016-April/002297.html GlueX Software Help Email List]: Ask a question!
 
 
* Offline Software Email List: announcements and discussion
 
* Offline Software Email List: announcements and discussion
 
** [mailto:halld-offline@jlab.org Send email to the list]
 
** [mailto:halld-offline@jlab.org Send email to the list]
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** [https://www.google.com/cse/publicurl?cx=001547825138043056762:dydinmymrvu Google search of archive]
 
** [https://www.google.com/cse/publicurl?cx=001547825138043056762:dydinmymrvu Google search of archive]
 
** [https://mailman.jlab.org/mailman/listinfo/halld-offline Information page] (subscribe, unsubscribe, list members, etc.)
 
** [https://mailman.jlab.org/mailman/listinfo/halld-offline Information page] (subscribe, unsubscribe, list members, etc.)
 +
* [https://groups.google.com/forum/#!forum/gluex-software Google Group for GlueX Software]
 +
**[[GlueX-Related Google Groups|Help on GlueX-related Google Groups]]
 +
** [https://mailman.jlab.org/pipermail/halld-offline/2016-April/002297.html Original announcement]
 +
* [https://slack.com/ Slack]
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** Chat application using the workspace '''jlab12gev'''
 +
** Click [https://jlab12gev.slack.com/signup here] to join. You must use your JLab email address.
 
* [[Email Lists#Simple Email Lists|Simple Email Lists]]: get notifications from automated tests
 
* [[Email Lists#Simple Email Lists|Simple Email Lists]]: get notifications from automated tests
 
* [[GlueX_Communications|Communication Instructions]]: Guides to communication systems used by GlueX
 
* [[GlueX_Communications|Communication Instructions]]: Guides to communication systems used by GlueX
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* [[Action Items Archive (May 4, 2010 and before)]]
 
* [[Action Items Archive (May 4, 2010 and before)]]
 
* [http://www.jlab.org/Hall-D/offline/Software_tasks.php Software Task List]
 
* [http://www.jlab.org/Hall-D/offline/Software_tasks.php Software Task List]
−
 
+
* [[Tracking resolution estimator (REZEST)]]
−
=Uncategorized Links=
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* [[ded]]
−
 
+
−
# [[Tracking resolution estimator (REZEST)]]
+
−
# [http://clasweb.jlab.org/wiki/index.php/HDDS2GEANT4_Installation_Notes Installing HDDS-to-GEANT4 converter]
+
−
# [http://dustbunny.physics.indiana.edu/mailman/private/gluex/2009-April/002627.html Duties of the GlueX Software Coordinator]
+
−
# [[ded]]
+
−
# [[Action Items From Hall-D Software Meetings|Action Items]]
+

Latest revision as of 18:52, 31 January 2024

News:

Quick Links:

The legacy version of this page is here.

General Information

Build Scripts: A Version Management System for GlueX describes a standard directory structure for GlueX software, how to create complete or partial builds, and how to specify versions of individual packages, both for building and for use. It is also available as GlueX Note 2793.

See below for other helpful links.

Shell Environment Set-Up

Building GlueX Software

GlueX and Containers

Software Documentation

Packages used in the GlueX software stack with links to package-specific documentation.

GlueX Software

Documentation for software packages specific to GlueX or to JLab.

  • A brief overview of the GlueX-specific software can be found here
  • Best practices in writing code for the HallD/GlueX software environment check out this link of HallD/GlueX Coding Conventions
  • A convenient way to enhance the impact of comments inside the code is to use Doxygen. The hooks and infrastructures are already implemented for the packages halld_recon and halld_sim.
  • Documentation Initiative

Software Packages

Special Topics

  1. Material on Splitoffs

Documentation for External Software Packages

Documentation on additional software packages used by GlueX. Development and maintenance of these are not directly related to GlueX.

Data Sets

Offline Data Monitoring

Computing Facilities

JLab

Grid

Off-Site Computing Resources

Software Management

Source Code Management

Testing and Debugging

Governance, Conventions, Standard Practices

Containers

Meetings and Reviews

Communication and Help

FAQ

Legacy Links

Retrieved from "https://halldweb1.jlab.org/wiki/index.php?title=GlueX_Offline_Software&oldid=124508"