MantisBT - Hall D Offline | |||||
View Issue Details | |||||
ID | Project | Category | View Status | Date Submitted | Last Update |
0000424 | Hall D Offline | General | public | 2014-12-02 16:52 | 2015-06-10 09:42 |
Reporter | davidl | ||||
Assigned To | davidl | ||||
Priority | normal | Severity | crash | Reproducibility | have not tried |
Status | resolved | Resolution | fixed | ||
Platform | OS | OS Version | |||
Summary | 0000424: Seg fault from mcsmear | ||||
Description | A seg. fault is reported when running mcsmear using conditions described in Tom's e-mail copied in the "Additional Information" section. In a subsequent e-mail, he notes that he's using Linux_CentOS6-x86_64-gcc4.4.6 and that files demonstrating the problem can be found here: https://docs.google.com/a/umail.iu.edu/file/d/0B2d57qMzynA9ejQ5Q3I0TDNTelE/edit?usp=drive_web [^] | ||||
Steps To Reproduce | |||||
Additional Information | Hi all, I’m trying to generate some MC using the commissioning branch and simulation conditions. I’m generating some events using genr8 and running them through hdgeant using control.in_9101. When I try to run mcsmear on the output, I get a segfault after processing a couple hundred events. I see the same behavior if I generate events using bggen. I included a stack trace below. Does anyone have any advice for fixing this? Tom Boettcher Program received signal SIGSEGV, Segmentation fault. [Switching to Thread 0x7ffff15f2700 (LWP 10822)] 0x0000000000bec50e in sgetn (this=0x7fffec5e9190, s="") at /usr/lib/gcc/x86_64-redhat-linux/4.4.6/../../../../include/c++/4.4.6/streambuf:335 335 { return this->xsgetn(__s, __n); } Missing separate debuginfos, use: debuginfo-install bzip2-libs-1.0.5-7.el6_0.x86_64 cyrus-sasl-lib-2.1.23-13.el6_3.1.x86_64 freetype-2.3.11-14.el6_3.1.x86_64 glibc-2.12-1.80.el6_3.7.x86_64 keyutils-libs-1.4-4.el6.x86_64 krb5-libs-1.9-33.el6_3.3.x86_64 libcom_err-1.41.12-12.el6.x86_64 libcurl-7.19.7-26.el6_2.4.x86_64 libgcc-4.4.6-4.el6.x86_64 libidn-1.18-2.el6.x86_64 libselinux-2.0.94-5.3.el6.x86_64 libssh2-1.2.2-11.el6_3.x86_64 libstdc++-4.4.6-4.el6.x86_64 nspr-4.9.2-0.el6_3.1.x86_64 nss-3.13.6-2.el6_3.x86_64 nss-softokn-freebl-3.12.9-11.el6.x86_64 nss-util-3.13.6-1.el6_3.x86_64 openldap-2.4.23-26.el6_3.2.x86_64 openssl-1.0.1e-30.el6_5.2.x86_64 pcre-7.8-4.el6.x86_64 zlib-1.2.3-27.el6.x86_64 (gdb) where #0 0x0000000000bec50e in sgetn (this=0x7fffec5e9190, s="") at /usr/lib/gcc/x86_64-redhat-linux/4.4.6/../../../../include/c++/4.4.6/streambuf:335 0000001 xstream::xdr::istream::operator>> (this=0x7fffec5e9190, s="") at external/xstream/src/xdr.cpp:133 0000002 0x00000000005bd5dd in hddm_s::BcalSiPMSpectrum::streamer (this=0x7fffec882290, istr=...) at /home/fs7/tboettch/HallD_Home/install/sim-recon/sim-recon-commissioning/Linux_CentOS6-x86_64-gcc4.4.6/include/HDDM/hddm_s.hpp:16529 0000003 0x00000000005bce25 in hddm_s::istream::sequencer (this=0x7fffec000d10, object=...) at /home/fs7/tboettch/HallD_Home/install/sim-recon/sim-recon-commissioning/Linux_CentOS6-x86_64-gcc4.4.6/include/HDDM/hddm_s.hpp:4961 0000004 0x00000000005e4ab1 in hddm_s::HDDM_ElementList<hddm_s::BcalSiPMSpectrum>::streamer (this=0x7fffec75a308, istr=...) at /home/fs7/tboettch/HallD_Home/install/sim-recon/sim-recon-commissioning/Linux_CentOS6-x86_64-gcc4.4.6/include/HDDM/hddm_s.hpp:428 0000005 0x00000000005bce25 in hddm_s::istream::sequencer (this=0x7fffec000d10, object=...) at /home/fs7/tboettch/HallD_Home/install/sim-recon/sim-recon-commissioning/Linux_CentOS6-x86_64-gcc4.4.6/include/HDDM/hddm_s.hpp:4961 0000006 0x00000000005bccaf in hddm_s::istream::operator>> (this=0x7fffec000d10, object=...) at /home/fs7/tboettch/HallD_Home/install/sim-recon/sim-recon-commissioning/Linux_CentOS6-x86_64-gcc4.4.6/include/HDDM/hddm_s.hpp:4951 0000007 0x00000000005bcec7 in hddm_s::istream::sequencer (this=0x7fffec000d10, object=<value optimized out>) at /home/fs7/tboettch/HallD_Home/install/sim-recon/sim-recon-commissioning/Linux_CentOS6-x86_64-gcc4.4.6/include/HDDM/hddm_s.hpp:4973 0000008 0x00000000005e5140 in hddm_s::HDDM_ElementList<hddm_s::BcalCell>::streamer (this=<value optimized out>, istr=...) at /home/fs7/tboettch/HallD_Home/install/sim-recon/sim-recon-commissioning/Linux_CentOS6-x86_64-gcc4.4.6/include/HDDM/hddm_s.hpp:428 0000009 0x00000000005bce25 in hddm_s::istream::sequencer (this=0x7fffec000d10, object=...) at /home/fs7/tboettch/HallD_Home/install/sim-recon/sim-recon-commissioning/Linux_CentOS6-x86_64-gcc4.4.6/include/HDDM/hddm_s.hpp:4961 0000010 0x00000000005bccaf in hddm_s::istream::operator>> (this=0x7fffec000d10, object=...) at /home/fs7/tboettch/HallD_Home/install/sim-recon/sim-recon-commissioning/Linux_CentOS6-x86_64-gcc4.4.6/include/HDDM/hddm_s.hpp:4951 0000011 0x00000000005bcec7 in hddm_s::istream::sequencer (this=0x7fffec000d10, object=<value optimized out>) at /home/fs7/tboettch/HallD_Home/install/sim-recon/sim-recon-commissioning/Linux_CentOS6-x86_64-gcc4.4.6/include/HDDM/hddm_s.hpp:4973 #12 0x00000000005bccaf in hddm_s::istream::operator>> (this=0x7fffec000d10, object=...) at /home/fs7/tboettch/HallD_Home/install/sim-recon/sim-recon-commissioning/Linux_CentOS6-x86_64-gcc4.4.6/include/HDDM/hddm_s.hpp:4951 0000013 0x00000000005bcec7 in hddm_s::istream::sequencer (this=0x7fffec000d10, object=<value optimized out>) at /home/fs7/tboettch/HallD_Home/install/sim-recon/sim-recon-commissioning/Linux_CentOS6-x86_64-gcc4.4.6/include/HDDM/hddm_s.hpp:4973 0000014 0x00000000005bccaf in hddm_s::istream::operator>> (this=0x7fffec000d10, object=...) at /home/fs7/tboettch/HallD_Home/install/sim-recon/sim-recon-commissioning/Linux_CentOS6-x86_64-gcc4.4.6/include/HDDM/hddm_s.hpp:4951 0000015 0x00000000005bcec7 in hddm_s::istream::sequencer (this=0x7fffec000d10, object=<value optimized out>) at /home/fs7/tboettch/HallD_Home/install/sim-recon/sim-recon-commissioning/Linux_CentOS6-x86_64-gcc4.4.6/include/HDDM/hddm_s.hpp:4973 0000016 0x00000000005dcb5f in hddm_s::HDDM_ElementList<hddm_s::PhysicsEvent>::streamer (this=<value optimized out>, istr=...) ---Type <return> to continue, or q <return> to quit--- at /home/fs7/tboettch/HallD_Home/install/sim-recon/sim-recon-commissioning/Linux_CentOS6-x86_64-gcc4.4.6/include/HDDM/hddm_s.hpp:428 0000017 0x00000000005bce25 in hddm_s::istream::sequencer (this=0x7fffec000d10, object=...) at /home/fs7/tboettch/HallD_Home/install/sim-recon/sim-recon-commissioning/Linux_CentOS6-x86_64-gcc4.4.6/include/HDDM/hddm_s.hpp:4961 0000018 0x00000000005bccaf in hddm_s::istream::operator>> (this=0x7fffec000d10, object=...) at /home/fs7/tboettch/HallD_Home/install/sim-recon/sim-recon-commissioning/Linux_CentOS6-x86_64-gcc4.4.6/include/HDDM/hddm_s.hpp:4951 0000019 0x00000000005bcec7 in hddm_s::istream::sequencer (this=0x7fffec000d10, object=<value optimized out>) at /home/fs7/tboettch/HallD_Home/install/sim-recon/sim-recon-commissioning/Linux_CentOS6-x86_64-gcc4.4.6/include/HDDM/hddm_s.hpp:4973 0000020 0x00000000005bccaf in hddm_s::istream::operator>> (this=0x7fffec000d10, object=...) at /home/fs7/tboettch/HallD_Home/install/sim-recon/sim-recon-commissioning/Linux_CentOS6-x86_64-gcc4.4.6/include/HDDM/hddm_s.hpp:4951 0000021 0x0000000000bca557 in hddm_s::istream::operator>> (this=0x7fffec000d10, record=...) at .Linux_CentOS6-x86_64-gcc4.4.6/libraries/HDDM/hddm_s++.cpp:217 0000022 0x0000000000b9cdc8 in DEventSourceHDDM::GetEvent (this=0x7fffec000fa0, event=...) at libraries/HDDM/DEventSourceHDDM.cc:109 0000023 0x0000000000c2f992 in jana::JEventSource::GetEvent (this=0x7fffec000fa0, event=...) at src/JANA/JEventSource.cc:54 0000024 0x0000000000bf174b in jana::JApplication::ReadEvent (this=0x7fffffffce20, event=...) at src/JANA/JApplication.cc:655 0000025 0x0000000000bf15c1 in jana::JApplication::EventBufferThread (this=0x7fffffffce20) at src/JANA/JApplication.cc:600 0000026 0x0000000000bf12af in LaunchEventBufferThread (arg=0x7fffffffce20) at src/JANA/JApplication.cc:552 0000027 0x0000003d99807851 in start_thread () from /lib64/libpthread.so.0 0000028 0x0000003d98ce811d in clone () from /lib64/libc.so.6_______________________________________________ Halld-offline mailing list Halld-offline@jlab.org https://mailman.jlab.org/mailman/listinfo/halld-offline [^] | ||||
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Attached Files | |||||
Issue History | |||||
Date Modified | Username | Field | Change | ||
2014-12-02 16:52 | davidl | New Issue | |||
2014-12-03 06:03 | davidl | Status | new => assigned | ||
2014-12-03 06:03 | davidl | Assigned To | => davidl | ||
2014-12-03 15:44 | davidl | Note Added: 0000619 | |||
2015-06-10 09:42 | davidl | Note Added: 0000647 | |||
2015-06-10 09:42 | davidl | Status | assigned => resolved | ||
2015-06-10 09:42 | davidl | Resolution | open => fixed |
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