Pseudo-terminal will not be allocated because stdin is not a terminal. mkdir: created directory ‘/u/scratch/gluex/b1pi/2020-09-21/Linux_RHEL7-x86_64-gcc4.8.5’ mkdir: created directory ‘/u/scratch/gluex/b1pi/2020-09-21/Linux_RHEL7-x86_64-gcc4.8.5/11366’ info: number of threads not defined, using default value 1 info: vertex parameters not defined, using default values 0 0 50 80 info: random number seed not defined, using genr8 default (different seed each run) NEVENTS = 50000 VERTEX = 0 0 50 80 NTHREADS = 1 B1PI_TEST_DIR = /group/halld/Software/hd_utilities/b1pi_test RUN = 11366 SEED = Copying script files and macros ... ‘/group/halld/Software/hd_utilities/b1pi_test/b1pi_cron_one.sh’ -> ‘./b1pi_cron_one.sh’ ‘/group/halld/Software/hd_utilities/b1pi_test/b1pi_cron.sh’ -> ‘./b1pi_cron.sh’ ‘/group/halld/Software/hd_utilities/b1pi_test/b1_pi.input’ -> ‘./b1_pi.input’ ‘/group/halld/Software/hd_utilities/b1pi_test/b1pi_message.sh’ -> ‘./b1pi_message.sh’ ‘/group/halld/Software/hd_utilities/b1pi_test/b1pi_test.sh’ -> ‘./b1pi_test.sh’ ‘/group/halld/Software/hd_utilities/b1pi_test/b1pi_test_valgrind.sh’ -> ‘./b1pi_test_valgrind.sh’ ‘/group/halld/Software/hd_utilities/b1pi_test/hddm_counter.pl’ -> ‘./hddm_counter.pl’ ‘/group/halld/Software/hd_utilities/b1pi_test/index.html’ -> ‘./index.html’ cp: omitting directory ‘/group/halld/Software/hd_utilities/b1pi_test/macros’ ‘/group/halld/Software/hd_utilities/b1pi_test/my_b1pi_test.sh’ -> ‘./my_b1pi_test.sh’ ‘/group/halld/Software/hd_utilities/b1pi_test/README’ -> ‘./README’ ‘/group/halld/Software/hd_utilities/b1pi_test/macros/anal1.C’ -> ‘./anal1.C’ ‘/group/halld/Software/hd_utilities/b1pi_test/macros/b1_pi.C’ -> ‘./b1_pi.C’ ‘/group/halld/Software/hd_utilities/b1pi_test/macros/b1pi_gen.C’ -> ‘./b1pi_gen.C’ ‘/group/halld/Software/hd_utilities/b1pi_test/macros/b1pi_gen.h’ -> ‘./b1pi_gen.h’ ‘/group/halld/Software/hd_utilities/b1pi_test/macros/b1_pi.h’ -> ‘./b1_pi.h’ ‘/group/halld/Software/hd_utilities/b1pi_test/macros/b1pi_rec.C’ -> ‘./b1pi_rec.C’ ‘/group/halld/Software/hd_utilities/b1pi_test/macros/b1pi_rec.h’ -> ‘./b1pi_rec.h’ ‘/group/halld/Software/hd_utilities/b1pi_test/macros/fit_voigt.C’ -> ‘./fit_voigt.C’ ‘/group/halld/Software/hd_utilities/b1pi_test/macros/makeallplots.C’ -> ‘./makeallplots.C’ ‘/group/halld/Software/hd_utilities/b1pi_test/macros/mass_X.C’ -> ‘./mass_X.C’ ‘/group/halld/Software/hd_utilities/b1pi_test/macros/mk_pics.C’ -> ‘./mk_pics.C’ ‘/group/halld/Software/hd_utilities/b1pi_test/macros/momentum.C’ -> ‘./momentum.C’ ‘/group/halld/Software/hd_utilities/b1pi_test/macros/StandardLabels.C’ -> ‘./StandardLabels.C’ ‘/group/halld/Software/hd_utilities/b1pi_test/macros/theta.C’ -> ‘./theta.C’ ‘/group/halld/Software/hd_utilities/b1pi_test/macros/update_db.py’ -> ‘./update_db.py’ Running genr8 ... /group/halld/Software/hd_utilities/b1pi_test/b1pi_test.sh: line 113: genr8: command not found Converting generated events to HDDM ... /group/halld/Software/hd_utilities/b1pi_test/b1pi_test.sh: line 116: genr8_2_hddm: command not found Creating control.in file ... Running hdgeant4 ... hdgeant4 run.mac /group/halld/Software/hd_utilities/b1pi_test/b1pi_test.sh: line 143: hdgeant4: command not found Running mcsmear ... mcsmear -PJANA:BATCH_MODE=1 -PTHREAD_TIMEOUT=500 hdgeant.hddm /group/halld/Software/hd_utilities/b1pi_test/b1pi_test.sh: line 148: mcsmear: command not found Running hd_root with danarest ... hd_root -PJANA:BATCH_MODE=1 --nthreads=1 -PTHREAD_TIMEOUT=500 -PPLUGINS=danarest hdgeant_smeared.hddm JANA >>OUTPUT_FILENAME: hd_root.root JANA >>Initializing plugin "/u/scratch/gluex/nightly/2020-09-21/Linux_RHEL7-x86_64-gcc4.8.5/halld_recon/Linux_RHEL7-x86_64-gcc4.8.5/plugins/danarest.so" ... Opened ROOT file "hd_root.root" ... JANA >>Launching threads . JANA >> THREAD_TIMEOUT_FIRST_EVENT is set smaller than THREAD_TIMEOUT JANA >> (30 < 500). THREAD_TIMEOUT_FIRST_EVENT will be set to 500 JANA ERROR>> JANA ERROR>> xxxxxxxxxxxx Unable to open event source "hdgeant_smeared.hddm"! xxxxxxxxxxxx JANA ERROR>> JANA ERROR>> xxxxxxxxxxxx NO VALID EVENT SOJANA >> JANA >>Telling all threads to quit ... URCES GIVEN !!! xxxxxxxxxxxx JANA ERROR>> JANA >> JANA >>No more event sources JANA >>Thread 0x7ff14173c700 completed gracefully: Mon Sep 21 08:04:47 2020 JANA >> JANA >>Telling all threads to quit ... JANA >>Merging thread 0 (0x7ff14173c700) ... JANA >>Merging event reader thread ... JANA >> 0 events processed (0 events read) Average rate: 0.0Hz Closed ROOT file JANA >>Closing shared object handle 0 ... Exit code: 66 Running hd_root with b1pi_hists & monitoring_hists ... hd_root -PJANA:BATCH_MODE=1 --nthreads=1 -PTHREAD_TIMEOUT=500 -PPLUGINS=b1pi_hists,monitoring_hists dana_rest.hddm JANA >>OUTPUT_FILENAME: hd_root.root JANA >>Initializing plugin "/u/scratch/gluex/nightly/2020-09-21/Linux_RHEL7-x86_64-gcc4.8.5/halld_recon/Linux_RHEL7-x86_64-gcc4.8.5/plugins/b1pi_hists.so" ... JANA >>Initializing plugin "/u/scratch/gluex/nightly/2020-09-21/Linux_RHEL7-x86_64-gcc4.8.5/halld_recon/Linux_RHEL7-x86_64-gcc4.8.5/plugins/monitoring_hists.so" ... Opened ROOT file "hd_root.root" ... JANA ERROR>> JANA ERROR>> xxxxxxxxxxxx Unable to open event source "dana_rest.hddm"! xxxxxxxxxxxx JANA ERROR>> JANA ERROR>> xxxxxxxxxxxx NO VALID EVENT SOURCES GIVEN !!! xxxxxxxxxxxx JANA >> JANA >>Telling all threads to quit ... JANA ERROR>> JANA >>Launching threads . JANA >> THREAD_TIMEOUT_FIRST_EVENT is set smaller than THREAD_TIMEOUT JANA >> (30 < 500). THREAD_TIMEOUT_FIRST_EVENT will be set to 500 JANA >> JANA >>Telling all threads to quit ... JANA >>Merging event reader thread ... JANA >> 0 events processed (0 events read) Average rate: 0.0Hz Closed ROOT file JANA >>Closing shared object handle 0 ... Exit code: 66 JANA >>Closing shared object handle 1 ... Create plots root -b -q mk_pics.C ------------------------------------------------------------ | Welcome to ROOT 6.08/06 http://root.cern.ch | | (c) 1995-2016, The ROOT Team | | Built for linuxx8664gcc | | From tag v6-08-06, 2 March 2017 | | Try '.help', '.demo', '.license', '.credits', '.quit'/'.q' | ------------------------------------------------------------ Processing mk_pics.C... #0 0x00007f8353e2e46c in waitpid () from /lib64/libc.so.6 #1 0x00007f8353dabf62 in do_system () from /lib64/libc.so.6 #2 0x00007f8354e31b19 in TUnixSystem::StackTrace (this=0x9988e0) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.5/root/root-6.08.06/core/unix/src/TUnixSystem.cxx:2405 #3 0x00007f8350326af5 in cling::MultiplexInterpreterCallbacks::PrintStackTrace() () from /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.5/root/root-6.08.06/lib/libCling.so #4 0x00007f8350326468 in cling_runtime_internal_throwIfInvalidPointer () from /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.5/root/root-6.08.06/lib/libCling.so #5 0x00007f835556a4ae in ?? () #6 0x00007ffc97be2b30 in ?? () #7 0x0000000001526120 in ?? () #8 0x0000000000000000 in ?? () terminate called after throwing an instance of 'cling::InvalidDerefException' what(): Trying to dereference null pointer or trying to call routine taking non-null arguments Save test data python update_db.py Traceback (most recent call last): File "update_db.py", line 28, in with open("data.txt") as f: IOError: [Errno 2] No such file or directory: 'data.txt' #count events /group/halld/Software/hd_utilities/b1pi_test/b1pi_cron_one.sh: line 28: hddm_counter.pl: command not found #count b1_pi.hddm /group/halld/Software/hd_utilities/b1pi_test/b1pi_cron_one.sh: line 29: hddm_counter.pl: command not found #count hdgeant.hddm /group/halld/Software/hd_utilities/b1pi_test/b1pi_cron_one.sh: line 30: hddm_counter.pl: command not found #count hdgeant_smeared.hddm /group/halld/Software/hd_utilities/b1pi_test/b1pi_cron_one.sh: line 31: hddm_counter.pl: command not found #count dana_rest.hddm /group/halld/Software/hd_utilities/b1pi_test/b1pi_cron_one.sh: line 32: hddm_counter.pl: command not found #count dana_rest_b1pi.hddm mkdir: created directory ‘/group/halld/www/halldweb/html/b1pi/2020-09-21/Linux_RHEL7-x86_64-gcc4.8.5’ mkdir: created directory ‘/group/halld/www/halldweb/html/b1pi/2020-09-21/Linux_RHEL7-x86_64-gcc4.8.5/Run11366’ cp: cannot stat ‘*.pdf’: No such file or directory cp: cannot stat ‘*.gif’: No such file or directory ‘index.html’ -> ‘/group/halld/www/halldweb/html/b1pi/2020-09-21/Linux_RHEL7-x86_64-gcc4.8.5/Run11366/index.html’ mkdir: created directory ‘/u/scratch/gluex/b1pi/2020-09-21/Linux_RHEL7-x86_64-gcc4.8.5/30480’ info: number of threads not defined, using default value 1 info: vertex parameters not defined, using default values 0 0 50 80 info: random number seed not defined, using genr8 default (different seed each run) NEVENTS = 50000 VERTEX = 0 0 50 80 NTHREADS = 1 B1PI_TEST_DIR = /group/halld/Software/hd_utilities/b1pi_test RUN = 30480 SEED = Copying script files and macros ... ‘/group/halld/Software/hd_utilities/b1pi_test/b1pi_cron_one.sh’ -> ‘./b1pi_cron_one.sh’ ‘/group/halld/Software/hd_utilities/b1pi_test/b1pi_cron.sh’ -> ‘./b1pi_cron.sh’ ‘/group/halld/Software/hd_utilities/b1pi_test/b1_pi.input’ -> ‘./b1_pi.input’ ‘/group/halld/Software/hd_utilities/b1pi_test/b1pi_message.sh’ -> ‘./b1pi_message.sh’ ‘/group/halld/Software/hd_utilities/b1pi_test/b1pi_test.sh’ -> ‘./b1pi_test.sh’ ‘/group/halld/Software/hd_utilities/b1pi_test/b1pi_test_valgrind.sh’ -> ‘./b1pi_test_valgrind.sh’ ‘/group/halld/Software/hd_utilities/b1pi_test/hddm_counter.pl’ -> ‘./hddm_counter.pl’ ‘/group/halld/Software/hd_utilities/b1pi_test/index.html’ -> ‘./index.html’ cp: omitting directory ‘/group/halld/Software/hd_utilities/b1pi_test/macros’ ‘/group/halld/Software/hd_utilities/b1pi_test/my_b1pi_test.sh’ -> ‘./my_b1pi_test.sh’ ‘/group/halld/Software/hd_utilities/b1pi_test/README’ -> ‘./README’ ‘/group/halld/Software/hd_utilities/b1pi_test/macros/anal1.C’ -> ‘./anal1.C’ ‘/group/halld/Software/hd_utilities/b1pi_test/macros/b1_pi.C’ -> ‘./b1_pi.C’ ‘/group/halld/Software/hd_utilities/b1pi_test/macros/b1pi_gen.C’ -> ‘./b1pi_gen.C’ ‘/group/halld/Software/hd_utilities/b1pi_test/macros/b1pi_gen.h’ -> ‘./b1pi_gen.h’ ‘/group/halld/Software/hd_utilities/b1pi_test/macros/b1_pi.h’ -> ‘./b1_pi.h’ ‘/group/halld/Software/hd_utilities/b1pi_test/macros/b1pi_rec.C’ -> ‘./b1pi_rec.C’ ‘/group/halld/Software/hd_utilities/b1pi_test/macros/b1pi_rec.h’ -> ‘./b1pi_rec.h’ ‘/group/halld/Software/hd_utilities/b1pi_test/macros/fit_voigt.C’ -> ‘./fit_voigt.C’ ‘/group/halld/Software/hd_utilities/b1pi_test/macros/makeallplots.C’ -> ‘./makeallplots.C’ ‘/group/halld/Software/hd_utilities/b1pi_test/macros/mass_X.C’ -> ‘./mass_X.C’ ‘/group/halld/Software/hd_utilities/b1pi_test/macros/mk_pics.C’ -> ‘./mk_pics.C’ ‘/group/halld/Software/hd_utilities/b1pi_test/macros/momentum.C’ -> ‘./momentum.C’ ‘/group/halld/Software/hd_utilities/b1pi_test/macros/StandardLabels.C’ -> ‘./StandardLabels.C’ ‘/group/halld/Software/hd_utilities/b1pi_test/macros/theta.C’ -> ‘./theta.C’ ‘/group/halld/Software/hd_utilities/b1pi_test/macros/update_db.py’ -> ‘./update_db.py’ Running genr8 ... /group/halld/Software/hd_utilities/b1pi_test/b1pi_test.sh: line 113: genr8: command not found Converting generated events to HDDM ... /group/halld/Software/hd_utilities/b1pi_test/b1pi_test.sh: line 116: genr8_2_hddm: command not found Creating control.in file ... Running hdgeant4 ... hdgeant4 run.mac /group/halld/Software/hd_utilities/b1pi_test/b1pi_test.sh: line 143: hdgeant4: command not found Running mcsmear ... mcsmear -PJANA:BATCH_MODE=1 -PTHREAD_TIMEOUT=500 hdgeant.hddm /group/halld/Software/hd_utilities/b1pi_test/b1pi_test.sh: line 148: mcsmear: command not found Running hd_root with danarest ... hd_root -PJANA:BATCH_MODE=1 --nthreads=1 -PTHREAD_TIMEOUT=500 -PPLUGINS=danarest hdgeant_smeared.hddm JANA >>OUTPUT_FILENAME: hd_root.root JANA >>Initializing plugin "/u/scratch/gluex/nightly/2020-09-21/Linux_RHEL7-x86_64-gcc4.8.5/halld_recon/Linux_RHEL7-x86_64-gcc4.8.5/plugins/danarest.so" ... Opened ROOT file "hd_root.root" ... JANA >>Launching threads . JANA >> THREAD_TIMEOUT_FIRST_EVENT is set smaller than THREAD_TIMEOUT JANA >> (30 < 500). THREAD_TIMEOUT_FIRST_EVENT will be set to 500 JANA ERROR>> JANA ERROR>> xxxxxxxxxxxx Unable to open event source "hdgeant_smeared.hddm"! xxxxxxxxxxxx JANA ERROR>> JANA ERROR>> xxxxxxxxxxxx NO VALID EVENT SOURCES GIVEN !!! xxxxxxxxxxxx JANA ERROR>> JANA >> JANA >>Telling all threads to quit ... JANA >> JANA >>No more event sources JANA >>Thread 0x7f4167fff700 completed gracefully: Mon Sep 21 08:06:40 2020 JANA >> JANA >>Telling all threads to quit ... JANA >>Merging thread 0 (0x7f4167fff700) ... JANA >>Merging event reader thread ... JANA >> 0 events processed (0 events read) Average rate: 0.0Hz Closed ROOT file JANA >>Closing shared object handle 0 ... Exit code: 66 Running hd_root with b1pi_hists & monitoring_hists ... hd_root -PJANA:BATCH_MODE=1 --nthreads=1 -PTHREAD_TIMEOUT=500 -PPLUGINS=b1pi_hists,monitoring_hists dana_rest.hddm JANA >>OUTPUT_FILENAME: hd_root.root JANA >>Initializing plugin "/u/scratch/gluex/nightly/2020-09-21/Linux_RHEL7-x86_64-gcc4.8.5/halld_recon/Linux_RHEL7-x86_64-gcc4.8.5/plugins/b1pi_hists.so" ... JANA >>Initializing plugin "/u/scratch/gluex/nightly/2020-09-21/Linux_RHEL7-x86_64-gcc4.8.5/halld_recon/Linux_RHEL7-x86_64-gcc4.8.5/plugins/monitoring_hists.so" ... Opened ROOT file "hd_root.root" ... JANA ERROR>> JANA ERROR>> xxxxxxxxxxxx Unable to open event source "dana_rest.hddm"! xxxxxxxxxxxx JANA ERROR>> JANA ERROR>> xxxxxxxxxxxx NO VALID EVENT SOURCES GIVEN !!! xxxxxJANA >> JANA >>Telling all threads to quit ... xxxxxxx JANA ERROR>> JANA >>Launching threads . JANA >> THREAD_TIMEOUT_FIRST_EVENT is set smaller than THREAD_TIMEOUT JANA >> (30 < 500). THREAD_TIMEOUT_FIRST_EVENT will be set to 500 JANA >> JANA >>Telling all threads to quit ... JANA >>Merging event reader thread ... JANA >> 0 events processed (0 events read) Average rate: 0.0Hz Closed ROOT file JANA >>Closing shared object handle 0 ... JANA >>Closing shared object handle 1 ... Exit code: 66 Create plots root -b -q mk_pics.C ------------------------------------------------------------ | Welcome to ROOT 6.08/06 http://root.cern.ch | | (c) 1995-2016, The ROOT Team | | Built for linuxx8664gcc | | From tag v6-08-06, 2 March 2017 | | Try '.help', '.demo', '.license', '.credits', '.quit'/'.q' | ------------------------------------------------------------ Processing mk_pics.C... #0 0x00007fc44e0bc46c in waitpid () from /lib64/libc.so.6 #1 0x00007fc44e039f62 in do_system () from /lib64/libc.so.6 #2 0x00007fc44f0bfb19 in TUnixSystem::StackTrace (this=0x1cbd8e0) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.5/root/root-6.08.06/core/unix/src/TUnixSystem.cxx:2405 #3 0x00007fc44a5b4af5 in cling::MultiplexInterpreterCallbacks::PrintStackTrace() () from /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.5/root/root-6.08.06/lib/libCling.so #4 0x00007fc44a5b4468 in cling_runtime_internal_throwIfInvalidPointer () from /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.5/root/root-6.08.06/lib/libCling.so #5 0x00007fc44f7f84ae in ?? () #6 0x00007ffebcf916b0 in ?? () #7 0x0000000002828de0 in ?? () #8 0x0000000000000000 in ?? () terminate called after throwing an instance of 'cling::InvalidDerefException' what(): Trying to dereference null pointer or trying to call routine taking non-null arguments Save test data python update_db.py Traceback (most recent call last): File "update_db.py", line 28, in with open("data.txt") as f: IOError: [Errno 2] No such file or directory: 'data.txt' #count events /group/halld/Software/hd_utilities/b1pi_test/b1pi_cron_one.sh: line 44: hddm_counter.pl: command not found #count b1_pi.hddm /group/halld/Software/hd_utilities/b1pi_test/b1pi_cron_one.sh: line 45: hddm_counter.pl: command not found #count hdgeant.hddm /group/halld/Software/hd_utilities/b1pi_test/b1pi_cron_one.sh: line 46: hddm_counter.pl: command not found #count hdgeant_smeared.hddm /group/halld/Software/hd_utilities/b1pi_test/b1pi_cron_one.sh: line 47: hddm_counter.pl: command not found #count dana_rest.hddm /group/halld/Software/hd_utilities/b1pi_test/b1pi_cron_one.sh: line 48: hddm_counter.pl: command not found #count dana_rest_b1pi.hddm mkdir: created directory ‘/group/halld/www/halldweb/html/b1pi/2020-09-21/Linux_RHEL7-x86_64-gcc4.8.5/Run30480’ cp: cannot stat ‘*.pdf’: No such file or directory cp: cannot stat ‘*.gif’: No such file or directory ‘index.html’ -> ‘/group/halld/www/halldweb/html/b1pi/2020-09-21/Linux_RHEL7-x86_64-gcc4.8.5/Run30480/index.html’