Pseudo-terminal will not be allocated because stdin is not a terminal. mkdir: created directory ‘/u/scratch/gluex/b1pi/2020-07-23/Linux_RHEL7-x86_64-gcc4.8.5’ mkdir: created directory ‘/u/scratch/gluex/b1pi/2020-07-23/Linux_RHEL7-x86_64-gcc4.8.5/11366’ info: number of threads not defined, using default value 1 info: vertex parameters not defined, using default values 0 0 50 80 info: random number seed not defined, using genr8 default (different seed each run) NEVENTS = 50000 VERTEX = 0 0 50 80 NTHREADS = 1 B1PI_TEST_DIR = /group/halld/Software/hd_utilities/b1pi_test RUN = 11366 SEED = Copying script files and macros ... ‘/group/halld/Software/hd_utilities/b1pi_test/b1pi_cron_one.sh’ -> ‘./b1pi_cron_one.sh’ ‘/group/halld/Software/hd_utilities/b1pi_test/b1pi_cron.sh’ -> ‘./b1pi_cron.sh’ ‘/group/halld/Software/hd_utilities/b1pi_test/b1_pi.input’ -> ‘./b1_pi.input’ ‘/group/halld/Software/hd_utilities/b1pi_test/b1pi_message.sh’ -> ‘./b1pi_message.sh’ ‘/group/halld/Software/hd_utilities/b1pi_test/b1pi_test.sh’ -> ‘./b1pi_test.sh’ ‘/group/halld/Software/hd_utilities/b1pi_test/b1pi_test_valgrind.sh’ -> ‘./b1pi_test_valgrind.sh’ ‘/group/halld/Software/hd_utilities/b1pi_test/hddm_counter.pl’ -> ‘./hddm_counter.pl’ ‘/group/halld/Software/hd_utilities/b1pi_test/index.html’ -> ‘./index.html’ cp: omitting directory ‘/group/halld/Software/hd_utilities/b1pi_test/macros’ ‘/group/halld/Software/hd_utilities/b1pi_test/my_b1pi_test.sh’ -> ‘./my_b1pi_test.sh’ ‘/group/halld/Software/hd_utilities/b1pi_test/README’ -> ‘./README’ ‘/group/halld/Software/hd_utilities/b1pi_test/macros/anal1.C’ -> ‘./anal1.C’ ‘/group/halld/Software/hd_utilities/b1pi_test/macros/b1_pi.C’ -> ‘./b1_pi.C’ ‘/group/halld/Software/hd_utilities/b1pi_test/macros/b1pi_gen.C’ -> ‘./b1pi_gen.C’ ‘/group/halld/Software/hd_utilities/b1pi_test/macros/b1pi_gen.h’ -> ‘./b1pi_gen.h’ ‘/group/halld/Software/hd_utilities/b1pi_test/macros/b1_pi.h’ -> ‘./b1_pi.h’ ‘/group/halld/Software/hd_utilities/b1pi_test/macros/b1pi_rec.C’ -> ‘./b1pi_rec.C’ ‘/group/halld/Software/hd_utilities/b1pi_test/macros/b1pi_rec.h’ -> ‘./b1pi_rec.h’ ‘/group/halld/Software/hd_utilities/b1pi_test/macros/fit_voigt.C’ -> ‘./fit_voigt.C’ ‘/group/halld/Software/hd_utilities/b1pi_test/macros/makeallplots.C’ -> ‘./makeallplots.C’ ‘/group/halld/Software/hd_utilities/b1pi_test/macros/mass_X.C’ -> ‘./mass_X.C’ ‘/group/halld/Software/hd_utilities/b1pi_test/macros/mk_pics.C’ -> ‘./mk_pics.C’ ‘/group/halld/Software/hd_utilities/b1pi_test/macros/momentum.C’ -> ‘./momentum.C’ ‘/group/halld/Software/hd_utilities/b1pi_test/macros/StandardLabels.C’ -> ‘./StandardLabels.C’ ‘/group/halld/Software/hd_utilities/b1pi_test/macros/theta.C’ -> ‘./theta.C’ ‘/group/halld/Software/hd_utilities/b1pi_test/macros/update_db.py’ -> ‘./update_db.py’ Running genr8 ... Using runNo: 11366 Maximum number of events: 50000 Opening file b1_pi.ascii for output. Reading: beamp.x beamp.y beamp.z beamMass Found: 0.000000 0.000000 9.000000 0.000000 Reading: targetp.x targetp.y targetp.z targetMass Found: 0.000000 0.000000 0.000000 0.938000 Reading: t-channelSlope Found: 5.000000 Reading: number of particles need to describe the decay Found: 12 Reading: part# chld1# chld2# prnt# Id nchld mass width chrg flag Found: 0 -1 -1 -1 14 0 0.938000 0.000000 1 11 Found: 1 2 3 -1 0 2 2.000000 0.100000 1 0 Found: 2 4 5 1 0 2 1.235000 0.142000 1 0 Found: 3 4 5 1 9 0 0.140000 0.000000 -1 11 Found: 4 6 7 2 0 2 0.783000 0.009000 0 0 Found: 5 6 7 2 8 0 0.140000 0.000000 1 11 Found: 6 8 9 4 0 2 0.776000 0.150000 0 0 Found: 7 10 11 4 7 2 0.135000 0.000000 0 0 Found: 8 10 11 6 8 0 0.140000 0.000000 1 11 Found: 9 10 11 6 9 0 0.140000 0.000000 -1 11 Found: 10 10 11 7 1 0 0.000000 0.000000 0 11 Found: 11 10 11 7 1 0 0.000000 0.000000 0 11 Found EOI---- Input File appears Fine. Calculating Lorentz Factor: 9000 Calculating Lorentz Factor: 8000 Calculating Lorentz Factor: 7000 Calculating Lorentz Factor: 6000 Calculating Lorentz Factor: 5000 Calculating Lorentz Factor: 4000 Calculating Lorentz Factor: 3000 Calculating Lorentz Factor: 2000 Calculating Lorentz Factor: 1000 Calculating Lorentz Factor: 100 Calculating Lorentz Factor: 90 Calculating Lorentz Factor: 80 Calculating Lorentz Factor: 70 Calculating Lorentz Factor: 60 Calculating Lorentz Factor: 50 Calculating Lorentz Factor: 40 Calculating Lorentz Factor: 30 Calculating Lorentz Factor: 20 Calculating Lorentz Factor: 10 Calculating Lorentz Factor: 0 Events generated: 100 Events accepted: 45 Events generated: 200 Events accepted: 86 Events generated: 300 Events accepted: 129 Events generated: 400 Events accepted: 179 Events generated: 500 Events accepted: 225 Events generated: 600 Events accepted: 269 Events generated: 700 Events accepted: 310 Events generated: 800 Events accepted: 351 Events generated: 900 Events accepted: 394 Events generated: 1000 Events accepted: 441 Events generated: 10000 Events accepted: 4553 Events generated: 20000 Events accepted: 9174 Events generated: 30000 Events accepted: 13731 Events generated: 40000 Events accepted: 18337 Events generated: 50000 Events accepted: 22880 Events generated: 60000 Events accepted: 27512 Events generated: 70000 Events accepted: 32095 Events generated: 80000 Events accepted: 36694 Events generated: 90000 Events accepted: 41305 Events generated: 100000 Events accepted: 45910 Max Lorentz Factor:0.001310 Events generated:108908 Events accepted:50000 Setting random number seed to: 1595508881 Converting generated events to HDDM ... Wrote event 1000 Wrote event 2000 Wrote event 3000 Wrote event 4000 Wrote event 5000 Wrote event 6000 Wrote event 7000 Wrote event 8000 Wrote event 9000 Wrote event 10000 Wrote event 11000 Wrote event 12000 Wrote event 13000 Wrote event 14000 Wrote event 15000 Wrote event 16000 Wrote event 17000 Wrote event 18000 Wrote event 19000 Wrote event 20000 Wrote event 21000 Wrote event 22000 Wrote event 23000 Wrote event 24000 Wrote event 25000 Wrote event 26000 Wrote event 27000 Wrote event 28000 Wrote event 29000 Wrote event 30000 Wrote event 31000 Wrote event 32000 Wrote event 33000 Wrote event 34000 Wrote event 35000 Wrote event 36000 Wrote event 37000 Wrote event 38000 Wrote event 39000 Wrote event 40000 Wrote event 41000 Wrote event 42000 Wrote event 43000 Wrote event 44000 Wrote event 45000 Wrote event 46000 Wrote event 47000 Wrote event 48000 Wrote event 49000 Wrote event 50000 Wrote 50000 events to b1_pi.hddm Creating control.in file ... Running hdgeant4 ... hdgeant4 run.mac ************************************************************* Geant4 version Name: geant4-10-02-patch-02 [MT] (17-June-2016) << in Multi-threaded mode >> Copyright : Geant4 Collaboration Reference : NIM A 506 (2003), 250-303 WWW : http://cern.ch/geant4 ************************************************************* JANA >>Created JCalibration object of type: JCalibrationCCDB JANA >>Generated via: JCalibration using CCDB for MySQL and SQLite databases JANA >>Run:11366 JANA >>URL: mysql://ccdb_user@hallddb.jlab.org/ccdb JANA >>context: variation=mc JANA >>comment: Variation for simulations with data conditions JANA >>Reading Magnetic field map from Magnets/Solenoid/solenoid_1200A_poisson_20160222 ... Nx=221 Ny=1 Nz=701 ) at 0x2bf7b40 Reading fine-mesh B-field data from /group/halld/www/halldweb/html/resources/Magnets/Solenoid/finemeshes/solenoid_1200A_poisson_20160222 rmin: 0 rmax: 88.5 dr: 0.1 zmin: 0 zmax: 600 dz: 0.1 Number of points in z = 6000 Number of points in r = 885 In G4HelixMixedStepper: Choosing Stepper for small steps. Choice is G4ClassicalRK4 JANA >>154921 entries found (Creating DGeometry: JANA >> Run requested:11366 found:11366 JANA >> Run validity range: 11366-11366 JANA >> URL="ccdb:///GEOMETRY/main_HDDS.xml" context="default" JANA >> Type="JGeometryXML" JANA >>Found 25 material maps in calib. DB JANA >>Read in 25 material maps for run 11366 containing 76153 grid points total JANA >> JANA >>Reading Pair Spectrometer Magnetic field map from Magnets/PairSpectrometer/PS_1.8T_20150513_test ... Nx=40 Ny=1 Nz=121 ) at 0x3d5bc20 Initializing the Geant4 kernel... Root geometry volume SITE::1 configured as World In G4HelixMixedStepper: Choosing Stepper for small steps. Choice is G4ClassicalRK4 STC: ALL parameters loaded from ccdb CDC: ALL parameters loaded from ccdb FDC: ALL parameters loaded from ccdb BCAL: ALL parameters loaded from ccdb FTOF: ALL parameters loaded from ccdb FCAL: ALL parameters loaded from ccdb Warning from GlueXDetectorConstruction::ConstructSDandField - unsupported sensitive volume TAC1 found in geometry definition. Additional geometry layer configured as ParallelWorld1 G4PhysicsListHelper::AddTransportation()--- G4CoupledTransportation is used New QGSP_FTFP_BERT physics list, replaces LEP with FTF/P for p/n/pi (/K?) Thresholds: 1) between BERT and FTF/P over the interval 6 to 8 GeV. 2) between FTF/P and QGS/P over the interval 12 to 25 GeV. -- quasiElastic was asked to be 1 Changed to 1 for QGS and to 0 (must be false) for FTF G4WT0 > G4WT0 > ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ G4WT0 > Local thread RunManagerKernel version Name: geant4-10-02-patch-02 [MT] G4WT0 > ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ G4WT0 > G4WT0 > Opened input file: b1_pi.hddm G4WT0 > In G4HelixMixedStepper: Choosing Stepper for small steps. Choice is G4ClassicalRK4 G4WT0 > Warning from GlueXDetectorConstruction::ConstructSDandField - unsupported sensitive volume TAC1 found in geometry definition. G4WT0 > G4PhysicsListHelper::AddTransportation()--- G4CoupledTransportation is used G4WT0 > New QGSP_FTFP_BERT physics list, replaces LEP with FTF/P for p/n/pi (/K?) Thresholds: G4WT0 > 1) between BERT and FTF/P over the interval 6 to 8 GeV. G4WT0 > 2) between FTF/P and QGS/P over the interval 12 to 25 GeV. G4WT0 > -- quasiElastic was asked to be 1 G4WT0 > Changed to 1 for QGS and to 0 (must be false) for FTF G4WT0 > JCalibration context: variation=mc G4WT0 > JCalibration context: variation=mc G4WT0 > Info: RF reference plane set to 65 cm. G4WT0 > New event 0 with starting seeds 960416608, 2004255418 G4WT0 > === WARNING in GlueXPrimaryGenerator::GeneratePrimaryVertex === G4WT0 > pi+ found in input MC record, geant3 type 8, PDG type 211 has unphysical mass: G4WT0 > expected 139.57 MeV, found 140 MeV, difference -430.298 keV =========================================================== There was a crash. This is the entire stack trace of all threads: =========================================================== Thread 2 (Thread 0x7f9eef0f1700 (LWP 3367)): #0 0x00007f9ef99ab4b9 in waitpid () at /lib64/libc.so.6 #1 0x00007f9ef9928f62 in do_system () at /lib64/libc.so.6 #2 0x00007f9ef9929311 in system () at /lib64/libc.so.6 #3 0x00007f9f02861b19 in TUnixSystem::StackTrace() (this=0x17b1100) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.5/root/root-6.08.06/core/unix/src/TUnixSystem.cxx:2405 #4 0x00007f9f028643ec in TUnixSystem::DispatchSignals(ESignals) (this=0x17b1100, sig=kSigSegmentationViolation) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.5/root/root-6.08.06/core/unix/src/TUnixSystem.cxx:3625 #5 0x00007f9efe753630 in () at /lib64/libpthread.so.0 #6 0x00007f9f0c356005 in GlueXPhotonBeamGenerator::GenerateTaggerHit(G4Event const*, double, double, int) (this=0x0, event=event entry=0x7f9edd1e16b0, energy=1.2598673968951787e-321, time=9.532824124368238e-130, time entry=-8.0160320639999973, bg=bg entry=0) at src/GlueXPhotonBeamGenerator.cc:618 #7 0x00007f9f0c370236 in GlueXPrimaryGeneratorAction::GeneratePrimariesHDDM(G4Event*) (this=0x7f9ee81069b0, anEvent=0x7f9edd1e16b0) at src/GlueXPrimaryGeneratorAction.cc:900 #8 0x00007f9f0841a25d in G4WorkerRunManager::GenerateEvent(int) (this=0x7f9ee8072970, i_event=) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.5/geant4/geant4.10.02.p02/source/run/src/G4WorkerRunManager.cc:376 #9 0x00007f9f0841828d in G4WorkerRunManager::ProcessOneEvent(int) (this=0x7f9ee8072970, i_event=) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.5/geant4/geant4.10.02.p02/source/run/src/G4WorkerRunManager.cc:250 #10 0x00007f9f08418429 in G4WorkerRunManager::DoEventLoop(int, char const*, int) (this=0x7f9ee8072970, n_event=100000, macroFile=0x0, n_select=-1) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.5/geant4/geant4.10.02.p02/source/run/src/G4WorkerRunManager.cc:231 #11 0x00007f9f0840ca1e in G4RunManager::BeamOn(int, char const*, int) (this=0x7f9ee8072970, n_event=100000, macroFile=0x0, n_select=-1) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.5/geant4/geant4.10.02.p02/source/run/src/G4RunManager.cc:273 #12 0x00007f9f084191b1 in G4WorkerRunManager::DoWork() (this=0x7f9ee8072970) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.5/geant4/geant4.10.02.p02/source/run/src/G4WorkerRunManager.cc:619 #13 0x00007f9f08422e84 in G4MTRunManagerKernel::StartThread(void*) (context=) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.5/geant4/geant4.10.02.p02/source/run/src/G4MTRunManagerKernel.cc:191 #14 0x00007f9efe74bea5 in start_thread () at /lib64/libpthread.so.0 #15 0x00007f9ef99e48dd in clone () at /lib64/libc.so.6 Thread 1 (Thread 0x7f9f0cd389c0 (LWP 3300)): #0 0x00007f9efe74fa35 in pthread_cond_wait GLIBC_2.3.2 () at /lib64/libpthread.so.0 #1 0x00007f9f084143b7 in G4MTRunManager::WaitForEndEventLoopWorkers() (this=0x7ffdbf2dd0b0) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.5/geant4/geant4.10.02.p02/source/run/src/G4MTRunManager.cc:797 #2 0x00007f9f084175ad in G4MTRunManager::RunTermination() (this=0x7ffdbf2dd0b0) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.5/geant4/geant4.10.02.p02/source/run/src/G4MTRunManager.cc:393 #3 0x00007f9f0840ca27 in G4RunManager::BeamOn(int, char const*, int) (this=0x7ffdbf2dd0b0, n_event=100000, macroFile=0x0, n_select=-1) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.5/geant4/geant4.10.02.p02/source/run/src/G4RunManager.cc:274 #4 0x00007f9f084246cc in G4RunMessenger::SetNewValue(G4UIcommand*, G4String) (this=0x1ae8130, command=command entry=0x1ae85a0, newValue=...) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.5/geant4/geant4.10.02.p02/source/run/src/G4RunMessenger.cc:376 #5 0x00007f9f04bd3d45 in G4UIcommand::DoIt(G4String) (this=this entry=0x1ae85a0, parameterList=...) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.5/geant4/geant4.10.02.p02/source/intercoms/src/G4UIcommand.cc:230 #6 0x00007f9f04bebe28 in G4UImanager::ApplyCommand(char const*) (this=0x18787e0, aCmd=) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.5/geant4/geant4.10.02.p02/source/intercoms/src/G4UImanager.cc:523 #7 0x00007f9f04bec8d8 in G4UImanager::ApplyCommand(G4String const&) (this=, aCmd=...) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.5/geant4/geant4.10.02.p02/source/intercoms/src/G4UImanager.cc:441 #8 0x00007f9f04bc433d in G4UIbatch::ExecCommand(G4String const&) (this=this entry=0x6438500, command=...) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.5/geant4/geant4.10.02.p02/source/intercoms/src/G4UIbatch.cc:170 #9 0x00007f9f04bc59db in G4UIbatch::SessionStart() (this=0x6438500) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.5/geant4/geant4.10.02.p02/source/intercoms/src/G4UIbatch.cc:215 #10 0x00007f9f04be70d3 in G4UImanager::ExecuteMacroFile(char const*) (this=this entry=0x18787e0, fileName=0x64384e8 "run.mac") at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.5/geant4/geant4.10.02.p02/source/intercoms/src/G4UImanager.cc:296 #11 0x00007f9f04bdd529 in G4UIcontrolMessenger::SetNewValue(G4UIcommand*, G4String) (this=0x1878bf0, command=command entry=0x18792f0, newValue=...) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.5/geant4/geant4.10.02.p02/source/intercoms/src/G4UIcontrolMessenger.cc:313 #12 0x00007f9f04bd3d45 in G4UIcommand::DoIt(G4String) (this=this entry=0x18792f0, parameterList=...) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.5/geant4/geant4.10.02.p02/source/intercoms/src/G4UIcommand.cc:230 #13 0x00007f9f04bebe28 in G4UImanager::ApplyCommand(char const*) (this=this entry=0x18787e0, aCmd=) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.5/geant4/geant4.10.02.p02/source/intercoms/src/G4UImanager.cc:523 #14 0x00007f9f04bec8d8 in G4UImanager::ApplyCommand(G4String const&) (this=this entry=0x18787e0, aCmd=...) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.5/geant4/geant4.10.02.p02/source/intercoms/src/G4UImanager.cc:441 #15 0x00007f9f0b7a894e in main(int, char**) (argc=2, argv=0x7ffdbf2df2d8) at src/hdgeant4.cc:230 #16 0x00007f9ef9908555 in __libc_start_main () at /lib64/libc.so.6 #17 0x0000000000684697 in _start () =========================================================== The lines below might hint at the cause of the crash. You may get help by asking at the ROOT forum http://root.cern.ch/forum. Only if you are really convinced it is a bug in ROOT then please submit a report at http://root.cern.ch/bugs. Please post the ENTIRE stack trace from above as an attachment in addition to anything else that might help us fixing this issue. =========================================================== #6 0x00007f9f0c356005 in GlueXPhotonBeamGenerator::GenerateTaggerHit(G4Event const*, double, double, int) (this=0x0, event=event entry=0x7f9edd1e16b0, energy=1.2598673968951787e-321, time=9.532824124368238e-130, time entry=-8.0160320639999973, bg=bg entry=0) at src/GlueXPhotonBeamGenerator.cc:618 #7 0x00007f9f0c370236 in GlueXPrimaryGeneratorAction::GeneratePrimariesHDDM(G4Event*) (this=0x7f9ee81069b0, anEvent=0x7f9edd1e16b0) at src/GlueXPrimaryGeneratorAction.cc:900 #8 0x00007f9f0841a25d in G4WorkerRunManager::GenerateEvent(int) (this=0x7f9ee8072970, i_event=) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.5/geant4/geant4.10.02.p02/source/run/src/G4WorkerRunManager.cc:376 #9 0x00007f9f0841828d in G4WorkerRunManager::ProcessOneEvent(int) (this=0x7f9ee8072970, i_event=) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.5/geant4/geant4.10.02.p02/source/run/src/G4WorkerRunManager.cc:250 #10 0x00007f9f08418429 in G4WorkerRunManager::DoEventLoop(int, char const*, int) (this=0x7f9ee8072970, n_event=100000, macroFile=0x0, n_select=-1) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.5/geant4/geant4.10.02.p02/source/run/src/G4WorkerRunManager.cc:231 #11 0x00007f9f0840ca1e in G4RunManager::BeamOn(int, char const*, int) (this=0x7f9ee8072970, n_event=100000, macroFile=0x0, n_select=-1) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.5/geant4/geant4.10.02.p02/source/run/src/G4RunManager.cc:273 #12 0x00007f9f084191b1 in G4WorkerRunManager::DoWork() (this=0x7f9ee8072970) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.5/geant4/geant4.10.02.p02/source/run/src/G4WorkerRunManager.cc:619 #13 0x00007f9f08422e84 in G4MTRunManagerKernel::StartThread(void*) (context=) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.5/geant4/geant4.10.02.p02/source/run/src/G4MTRunManagerKernel.cc:191 #14 0x00007f9efe74bea5 in start_thread () at /lib64/libpthread.so.0 #15 0x00007f9ef99e48dd in clone () at /lib64/libc.so.6 =========================================================== Running mcsmear ... mcsmear -PJANA:BATCH_MODE=1 -PTHREAD_TIMEOUT=500 hdgeant.hddm JANA >> Enabling z compression of output HDDM file stream (default) JANA >> Enabling CRC data integrity check in output HDDM file stream JANA >>Opening source "hdgeant.hddm" of type: HDDM JANA >>Launching threads . JANA >> THREAD_TIMEOUT_FIRST_EVENT is set smaller than THREAD_TIMEOUT JANA >> (30 < 500). THREAD_TIMEOUT_FIRST_EVENT will be set to 500 JANA >>Installing special signal handler for mcsmear... JANA >> JANA >>No more event sources JANA >>Thread 0x7f47229ff700 completed gracefully: Thu Jul 23 08:02:05 2020 JANA >>Merging thread 0 (0x7f47229ff700) ... Closed HDDM file 0 event written to hdgeant_smeared.hddm JANA >>Merging event reader thread ... JANA >> 0 events processed (0 events read) Average rate: 0.0Hz Running hd_root with danarest ... hd_root -PJANA:BATCH_MODE=1 --nthreads=1 -PTHREAD_TIMEOUT=500 -PPLUGINS=danarest hdgeant_smeared.hddm JANA >>OUTPUT_FILENAME: hd_root.root JANA >>Initializing plugin "/u/scratch/gluex/nightly/2020-07-23/Linux_RHEL7-x86_64-gcc4.8.5/halld_recon/Linux_RHEL7-x86_64-gcc4.8.5/plugins/danarest.so" ... Opened ROOT file "hd_root.root" ... JANA >>Opening source "hdgeant_smeared.hddm" of type: HDDM JANA >>Launching threads . JANA >> THREAD_TIMEOUT_FIRST_EVENT is set smaller than THREAD_TIMEOUT JANA >> (30 < 500). THREAD_TIMEOUT_FIRST_EVENT will be set to 500 JANA >> JANA >>No more event sources JANA >>Thread 0x7f79a7c93700 completed gracefully: Thu Jul 23 08:02:07 2020 JANA >>Merging thread 0 (0x7f79a7c93700) ... JANA >>Merging event reader thread ... JANA >> 0 events processed (0 events read) Average rate: 0.0Hz Closed ROOT file JANA >>Closing shared object handle 0 ... Running hd_root with b1pi_hists & monitoring_hists ... hd_root -PJANA:BATCH_MODE=1 --nthreads=1 -PTHREAD_TIMEOUT=500 -PPLUGINS=b1pi_hists,monitoring_hists dana_rest.hddm JANA >>OUTPUT_FILENAME: hd_root.root JANA >>Initializing plugin "/u/scratch/gluex/nightly/2020-07-23/Linux_RHEL7-x86_64-gcc4.8.5/halld_recon/Linux_RHEL7-x86_64-gcc4.8.5/plugins/b1pi_hists.so" ... JANA >>Initializing plugin "/u/scratch/gluex/nightly/2020-07-23/Linux_RHEL7-x86_64-gcc4.8.5/halld_recon/Linux_RHEL7-x86_64-gcc4.8.5/plugins/monitoring_hists.so" ... Opened ROOT file "hd_root.root" ... JANA ERROR>> JANA ERROR>> xxxxxxxxxxxx Unable to open event source "dana_rest.hddm"! xxxxxxxxxxxx JANA ERROR>> JANA ERROR>> xxxxxxxxxxxx NO VALID EVENT SOURCES GIVEN !!! xxxxxxxxxxxJANA >> JANA >>Telling all threads to quit ... x JANA ERROR>> JANA >>Launching threads . JANA >> THREAD_TIMEOUT_FIRST_EVENT is set smaller than THREAD_TIMEOUT JANA >> (30 < 500). THREAD_TIMEOUT_FIRST_EVENT will be set to 500 JANA >> JANA >>Telling all threads to quit ... JANA >>Merging event reader thread ... JANA >> 0 events processed (0 events read) Average rate: 0.0Hz Closed ROOT file JANA >>Closing shared object handle 0 ... Exit code: 66 JANA >>Closing shared object handle 1 ... Create plots root -b -q mk_pics.C ------------------------------------------------------------ | Welcome to ROOT 6.08/06 http://root.cern.ch | | (c) 1995-2016, The ROOT Team | | Built for linuxx8664gcc | | From tag v6-08-06, 2 March 2017 | | Try '.help', '.demo', '.license', '.credits', '.quit'/'.q' | ------------------------------------------------------------ Processing mk_pics.C... #0 0x00007f7134af346c in waitpid () from /lib64/libc.so.6 #1 0x00007f7134a70f62 in do_system () from /lib64/libc.so.6 #2 0x00007f7135af6b19 in TUnixSystem::StackTrace (this=0x1df28e0) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.5/root/root-6.08.06/core/unix/src/TUnixSystem.cxx:2405 #3 0x00007f7130febaf5 in cling::MultiplexInterpreterCallbacks::PrintStackTrace() () from /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.5/root/root-6.08.06/lib/libCling.so #4 0x00007f7130feb468 in cling_runtime_internal_throwIfInvalidPointer () from /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.5/root/root-6.08.06/lib/libCling.so #5 0x00007f713622f4ae in ?? () #6 0x00007fff2acc3320 in ?? () #7 0x0000000002969ba0 in ?? () #8 0x0000000000000000 in ?? () terminate called after throwing an instance of 'cling::InvalidDerefException' what(): Trying to dereference null pointer or trying to call routine taking non-null arguments Save test data python update_db.py Traceback (most recent call last): File "update_db.py", line 28, in with open("data.txt") as f: IOError: [Errno 2] No such file or directory: 'data.txt' #count events /group/halld/Software/hd_utilities/b1pi_test/b1pi_cron_one.sh: line 28: hddm_counter.pl: command not found #count b1_pi.hddm /group/halld/Software/hd_utilities/b1pi_test/b1pi_cron_one.sh: line 29: hddm_counter.pl: command not found #count hdgeant.hddm /group/halld/Software/hd_utilities/b1pi_test/b1pi_cron_one.sh: line 30: hddm_counter.pl: command not found #count hdgeant_smeared.hddm /group/halld/Software/hd_utilities/b1pi_test/b1pi_cron_one.sh: line 31: hddm_counter.pl: command not found #count dana_rest.hddm /group/halld/Software/hd_utilities/b1pi_test/b1pi_cron_one.sh: line 32: hddm_counter.pl: command not found #count dana_rest_b1pi.hddm mkdir: created directory ‘/group/halld/www/halldweb/html/b1pi/2020-07-23/Linux_RHEL7-x86_64-gcc4.8.5’ mkdir: created directory ‘/group/halld/www/halldweb/html/b1pi/2020-07-23/Linux_RHEL7-x86_64-gcc4.8.5/Run11366’ cp: cannot stat ‘*.pdf’: No such file or directory cp: cannot stat ‘*.gif’: No such file or directory ‘index.html’ -> ‘/group/halld/www/halldweb/html/b1pi/2020-07-23/Linux_RHEL7-x86_64-gcc4.8.5/Run11366/index.html’ mkdir: created directory ‘/u/scratch/gluex/b1pi/2020-07-23/Linux_RHEL7-x86_64-gcc4.8.5/30480’ info: number of threads not defined, using default value 1 info: vertex parameters not defined, using default values 0 0 50 80 info: random number seed not defined, using genr8 default (different seed each run) NEVENTS = 50000 VERTEX = 0 0 50 80 NTHREADS = 1 B1PI_TEST_DIR = /group/halld/Software/hd_utilities/b1pi_test RUN = 30480 SEED = Copying script files and macros ... ‘/group/halld/Software/hd_utilities/b1pi_test/b1pi_cron_one.sh’ -> ‘./b1pi_cron_one.sh’ ‘/group/halld/Software/hd_utilities/b1pi_test/b1pi_cron.sh’ -> ‘./b1pi_cron.sh’ ‘/group/halld/Software/hd_utilities/b1pi_test/b1_pi.input’ -> ‘./b1_pi.input’ ‘/group/halld/Software/hd_utilities/b1pi_test/b1pi_message.sh’ -> ‘./b1pi_message.sh’ ‘/group/halld/Software/hd_utilities/b1pi_test/b1pi_test.sh’ -> ‘./b1pi_test.sh’ ‘/group/halld/Software/hd_utilities/b1pi_test/b1pi_test_valgrind.sh’ -> ‘./b1pi_test_valgrind.sh’ ‘/group/halld/Software/hd_utilities/b1pi_test/hddm_counter.pl’ -> ‘./hddm_counter.pl’ ‘/group/halld/Software/hd_utilities/b1pi_test/index.html’ -> ‘./index.html’ cp: omitting directory ‘/group/halld/Software/hd_utilities/b1pi_test/macros’ ‘/group/halld/Software/hd_utilities/b1pi_test/my_b1pi_test.sh’ -> ‘./my_b1pi_test.sh’ ‘/group/halld/Software/hd_utilities/b1pi_test/README’ -> ‘./README’ ‘/group/halld/Software/hd_utilities/b1pi_test/macros/anal1.C’ -> ‘./anal1.C’ ‘/group/halld/Software/hd_utilities/b1pi_test/macros/b1_pi.C’ -> ‘./b1_pi.C’ ‘/group/halld/Software/hd_utilities/b1pi_test/macros/b1pi_gen.C’ -> ‘./b1pi_gen.C’ ‘/group/halld/Software/hd_utilities/b1pi_test/macros/b1pi_gen.h’ -> ‘./b1pi_gen.h’ ‘/group/halld/Software/hd_utilities/b1pi_test/macros/b1_pi.h’ -> ‘./b1_pi.h’ ‘/group/halld/Software/hd_utilities/b1pi_test/macros/b1pi_rec.C’ -> ‘./b1pi_rec.C’ ‘/group/halld/Software/hd_utilities/b1pi_test/macros/b1pi_rec.h’ -> ‘./b1pi_rec.h’ ‘/group/halld/Software/hd_utilities/b1pi_test/macros/fit_voigt.C’ -> ‘./fit_voigt.C’ ‘/group/halld/Software/hd_utilities/b1pi_test/macros/makeallplots.C’ -> ‘./makeallplots.C’ ‘/group/halld/Software/hd_utilities/b1pi_test/macros/mass_X.C’ -> ‘./mass_X.C’ ‘/group/halld/Software/hd_utilities/b1pi_test/macros/mk_pics.C’ -> ‘./mk_pics.C’ ‘/group/halld/Software/hd_utilities/b1pi_test/macros/momentum.C’ -> ‘./momentum.C’ ‘/group/halld/Software/hd_utilities/b1pi_test/macros/StandardLabels.C’ -> ‘./StandardLabels.C’ ‘/group/halld/Software/hd_utilities/b1pi_test/macros/theta.C’ -> ‘./theta.C’ ‘/group/halld/Software/hd_utilities/b1pi_test/macros/update_db.py’ -> ‘./update_db.py’ Running genr8 ... Using runNo: 30480 Maximum number of events: 50000 Opening file b1_pi.ascii for output. Reading: beamp.x beamp.y beamp.z beamMass Found: 0.000000 0.000000 9.000000 0.000000 Reading: targetp.x targetp.y targetp.z targetMass Found: 0.000000 0.000000 0.000000 0.938000 Reading: t-channelSlope Found: 5.000000 Reading: number of particles need to describe the decay Found: 12 Reading: part# chld1# chld2# prnt# Id nchld mass width chrg flag Found: 0 -1 -1 -1 14 0 0.938000 0.000000 1 11 Found: 1 2 3 -1 0 2 2.000000 0.100000 1 0 Found: 2 4 5 1 0 2 1.235000 0.142000 1 0 Found: 3 4 5 1 9 0 0.140000 0.000000 -1 11 Found: 4 6 7 2 0 2 0.783000 0.009000 0 0 Found: 5 6 7 2 8 0 0.140000 0.000000 1 11 Found: 6 8 9 4 0 2 0.776000 0.150000 0 0 Found: 7 10 11 4 7 2 0.135000 0.000000 0 0 Found: 8 10 11 6 8 0 0.140000 0.000000 1 11 Found: 9 10 11 6 9 0 0.140000 0.000000 -1 11 Found: 10 10 11 7 1 0 0.000000 0.000000 0 11 Found: 11 10 11 7 1 0 0.000000 0.000000 0 11 Found EOI---- Input File appears Fine. Calculating Lorentz Factor: 9000 Calculating Lorentz Factor: 8000 Calculating Lorentz Factor: 7000 Calculating Lorentz Factor: 6000 Calculating Lorentz Factor: 5000 Calculating Lorentz Factor: 4000 Calculating Lorentz Factor: 3000 Calculating Lorentz Factor: 2000 Calculating Lorentz Factor: 1000 Calculating Lorentz Factor: 100 Calculating Lorentz Factor: 90 Calculating Lorentz Factor: 80 Calculating Lorentz Factor: 70 Calculating Lorentz Factor: 60 Calculating Lorentz Factor: 50 Calculating Lorentz Factor: 40 Calculating Lorentz Factor: 30 Calculating Lorentz Factor: 20 Calculating Lorentz Factor: 10 Calculating Lorentz Factor: 0 Events generated: 100 Events accepted: 53 Events generated: 200 Events accepted: 104 Events generated: 300 Events accepted: 157 Events generated: 400 Events accepted: 214 Events generated: 500 Events accepted: 260 Events generated: 600 Events accepted: 306 Events generated: 700 Events accepted: 356 Events generated: 800 Events accepted: 397 Events generated: 900 Events accepted: 443 Events generated: 1000 Events accepted: 488 Events generated: 10000 Events accepted: 4663 Events generated: 20000 Events accepted: 9330 Events generated: 30000 Events accepted: 14135 Events generated: 40000 Events accepted: 18863 Events generated: 50000 Events accepted: 23650 Events generated: 60000 Events accepted: 28370 Events generated: 70000 Events accepted: 33134 Events generated: 80000 Events accepted: 37889 Events generated: 90000 Events accepted: 42634 Events generated: 100000 Events accepted: 47284 Max Lorentz Factor:0.001269 Events generated:105833 Events accepted:50000 Setting random number seed to: 1595509381 Converting generated events to HDDM ... Wrote event 1000 Wrote event 2000 Wrote event 3000 Wrote event 4000 Wrote event 5000 Wrote event 6000 Wrote event 7000 Wrote event 8000 Wrote event 9000 Wrote event 10000 Wrote event 11000 Wrote event 12000 Wrote event 13000 Wrote event 14000 Wrote event 15000 Wrote event 16000 Wrote event 17000 Wrote event 18000 Wrote event 19000 Wrote event 20000 Wrote event 21000 Wrote event 22000 Wrote event 23000 Wrote event 24000 Wrote event 25000 Wrote event 26000 Wrote event 27000 Wrote event 28000 Wrote event 29000 Wrote event 30000 Wrote event 31000 Wrote event 32000 Wrote event 33000 Wrote event 34000 Wrote event 35000 Wrote event 36000 Wrote event 37000 Wrote event 38000 Wrote event 39000 Wrote event 40000 Wrote event 41000 Wrote event 42000 Wrote event 43000 Wrote event 44000 Wrote event 45000 Wrote event 46000 Wrote event 47000 Wrote event 48000 Wrote event 49000 Wrote event 50000 Wrote 50000 events to b1_pi.hddm Creating control.in file ... Running hdgeant4 ... hdgeant4 run.mac ************************************************************* Geant4 version Name: geant4-10-02-patch-02 [MT] (17-June-2016) << in Multi-threaded mode >> Copyright : Geant4 Collaboration Reference : NIM A 506 (2003), 250-303 WWW : http://cern.ch/geant4 ************************************************************* JANA >>Created JCalibration object of type: JCalibrationCCDB JANA >>Generated via: JCalibration using CCDB for MySQL and SQLite databases JANA >>Run:30480 JANA >>URL: mysql://ccdb_user@hallddb.jlab.org/ccdb JANA >>context: variation=mc JANA >>comment: Variation for simulations with data conditions JANA >>Reading Magnetic field map from Magnets/Solenoid/solenoid_1350A_poisson_20160222 ... Nx=221 Ny=1 Nz=701 ) at 0x3ab7150 Reading fine-mesh B-field data from /group/halld/www/halldweb/html/resources/Magnets/Solenoid/finemeshes/solenoid_1350A_poisson_20160222 rmin: 0 rmax: 88.5 dr: 0.1 zmin: 0 zmax: 600 dz: 0.1 Number of points in z = 6000 Number of points in r = 885 In G4HelixMixedStepper: Choosing Stepper for small steps. Choice is G4ClassicalRK4 JANA >>154921 entries found (Creating DGeometry: JANA >> Run requested:30480 found:30480 JANA >> Run validity range: 30480-30480 JANA >> URL="ccdb:///GEOMETRY/main_HDDS.xml" context="default" JANA >> Type="JGeometryXML" JANA >>Found 25 material maps in calib. DB JANA >>Read in 25 material maps for run 30480 containing 76153 grid points total JANA >> JANA >>Reading Pair Spectrometer Magnetic field map from Magnets/PairSpectrometer/PS_1.8T_20150513_test ... Nx=40 Ny=1 Nz=121 ) at 0x6940db0 Initializing the Geant4 kernel... Root geometry volume SITE::1 configured as World In G4HelixMixedStepper: Choosing Stepper for small steps. Choice is G4ClassicalRK4 STC: ALL parameters loaded from ccdb CDC: ALL parameters loaded from ccdb FDC: ALL parameters loaded from ccdb BCAL: ALL parameters loaded from ccdb FTOF: ALL parameters loaded from ccdb FCAL: ALL parameters loaded from ccdb Warning from GlueXDetectorConstruction::ConstructSDandField - unsupported sensitive volume TAC1 found in geometry definition. Additional geometry layer configured as ParallelWorld1 G4PhysicsListHelper::AddTransportation()--- G4CoupledTransportation is used New QGSP_FTFP_BERT physics list, replaces LEP with FTF/P for p/n/pi (/K?) Thresholds: 1) between BERT and FTF/P over the interval 6 to 8 GeV. 2) between FTF/P and QGS/P over the interval 12 to 25 GeV. -- quasiElastic was asked to be 1 Changed to 1 for QGS and to 0 (must be false) for FTF G4WT0 > G4WT0 > ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ G4WT0 > Local thread RunManagerKernel version Name: geant4-10-02-patch-02 [MT] G4WT0 > ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ G4WT0 > G4WT0 > Opened input file: b1_pi.hddm G4WT0 > In G4HelixMixedStepper: Choosing Stepper for small steps. Choice is G4ClassicalRK4 G4WT0 > Warning from GlueXDetectorConstruction::ConstructSDandField - unsupported sensitive volume TAC1 found in geometry definition. G4WT0 > G4PhysicsListHelper::AddTransportation()--- G4CoupledTransportation is used G4WT0 > New QGSP_FTFP_BERT physics list, replaces LEP with FTF/P for p/n/pi (/K?) Thresholds: G4WT0 > 1) between BERT and FTF/P over the interval 6 to 8 GeV. G4WT0 > 2) between FTF/P and QGS/P over the interval 12 to 25 GeV. G4WT0 > -- quasiElastic was asked to be 1 G4WT0 > Changed to 1 for QGS and to 0 (must be false) for FTF G4WT0 > JCalibration context: variation=mc G4WT0 > JCalibration context: variation=mc G4WT0 > Info: RF reference plane set to 65 cm. G4WT0 > New event 0 with starting seeds 960416608, 2004255418 =========================================================== There was a crash. This is the entire stack trace of all threads: =========================================================== Thread 2 (Thread 0x7f4b3d904700 (LWP 3706)): #0 0x00007f4b481be4b9 in waitpid () at /lib64/libc.so.6 #1 0x00007f4b4813bf62 in do_system () at /lib64/libc.so.6 #2 0x00007f4b4813c311 in system () at /lib64/libc.so.6 #3 0x00007f4b51074b19 in TUnixSystem::StackTrace() (this=0x2667100) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.5/root/root-6.08.06/core/unix/src/TUnixSystem.cxx:2405 #4 0x00007f4b510773ec in TUnixSystem::DispatchSignals(ESignals) (this=0x2667100, sig=kSigSegmentationViolation) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.5/root/root-6.08.06/core/unix/src/TUnixSystem.cxx:3625 #5 0x00007f4b4cf66630 in () at /lib64/libpthread.so.0 #6 0x00007f4b5ab69005 in GlueXPhotonBeamGenerator::GenerateTaggerHit(G4Event const*, double, double, int) (this=0x0, event=event entry=0x7f4b2d1e13b0, energy=1.2598673968951787e-321, time=9.532824124368238e-130, time entry=-8.0160320639999973, bg=bg entry=0) at src/GlueXPhotonBeamGenerator.cc:618 #7 0x00007f4b5ab83236 in GlueXPrimaryGeneratorAction::GeneratePrimariesHDDM(G4Event*) (this=0x7f4b381069b0, anEvent=0x7f4b2d1e13b0) at src/GlueXPrimaryGeneratorAction.cc:900 #8 0x00007f4b56c2d25d in G4WorkerRunManager::GenerateEvent(int) (this=0x7f4b38072970, i_event=) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.5/geant4/geant4.10.02.p02/source/run/src/G4WorkerRunManager.cc:376 #9 0x00007f4b56c2b28d in G4WorkerRunManager::ProcessOneEvent(int) (this=0x7f4b38072970, i_event=) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.5/geant4/geant4.10.02.p02/source/run/src/G4WorkerRunManager.cc:250 #10 0x00007f4b56c2b429 in G4WorkerRunManager::DoEventLoop(int, char const*, int) (this=0x7f4b38072970, n_event=100000, macroFile=0x0, n_select=-1) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.5/geant4/geant4.10.02.p02/source/run/src/G4WorkerRunManager.cc:231 #11 0x00007f4b56c1fa1e in G4RunManager::BeamOn(int, char const*, int) (this=0x7f4b38072970, n_event=100000, macroFile=0x0, n_select=-1) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.5/geant4/geant4.10.02.p02/source/run/src/G4RunManager.cc:273 #12 0x00007f4b56c2c1b1 in G4WorkerRunManager::DoWork() (this=0x7f4b38072970) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.5/geant4/geant4.10.02.p02/source/run/src/G4WorkerRunManager.cc:619 #13 0x00007f4b56c35e84 in G4MTRunManagerKernel::StartThread(void*) (context=) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.5/geant4/geant4.10.02.p02/source/run/src/G4MTRunManagerKernel.cc:191 #14 0x00007f4b4cf5eea5 in start_thread () at /lib64/libpthread.so.0 #15 0x00007f4b481f78dd in clone () at /lib64/libc.so.6 Thread 1 (Thread 0x7f4b5b54b9c0 (LWP 3672)): #0 0x00007f4b4cf62a35 in pthread_cond_wait GLIBC_2.3.2 () at /lib64/libpthread.so.0 #1 0x00007f4b56c273b7 in G4MTRunManager::WaitForEndEventLoopWorkers() (this=0x7ffea0e9f1a0) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.5/geant4/geant4.10.02.p02/source/run/src/G4MTRunManager.cc:797 #2 0x00007f4b56c2a5ad in G4MTRunManager::RunTermination() (this=0x7ffea0e9f1a0) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.5/geant4/geant4.10.02.p02/source/run/src/G4MTRunManager.cc:393 #3 0x00007f4b56c1fa27 in G4RunManager::BeamOn(int, char const*, int) (this=0x7ffea0e9f1a0, n_event=100000, macroFile=0x0, n_select=-1) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.5/geant4/geant4.10.02.p02/source/run/src/G4RunManager.cc:274 #4 0x00007f4b56c376cc in G4RunMessenger::SetNewValue(G4UIcommand*, G4String) (this=0x299e130, command=command entry=0x299e5a0, newValue=...) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.5/geant4/geant4.10.02.p02/source/run/src/G4RunMessenger.cc:376 #5 0x00007f4b533e6d45 in G4UIcommand::DoIt(G4String) (this=this entry=0x299e5a0, parameterList=...) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.5/geant4/geant4.10.02.p02/source/intercoms/src/G4UIcommand.cc:230 #6 0x00007f4b533fee28 in G4UImanager::ApplyCommand(char const*) (this=0x272e7e0, aCmd=) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.5/geant4/geant4.10.02.p02/source/intercoms/src/G4UImanager.cc:523 #7 0x00007f4b533ff8d8 in G4UImanager::ApplyCommand(G4String const&) (this=, aCmd=...) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.5/geant4/geant4.10.02.p02/source/intercoms/src/G4UImanager.cc:441 #8 0x00007f4b533d733d in G4UIbatch::ExecCommand(G4String const&) (this=this entry=0x4f53d20, command=...) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.5/geant4/geant4.10.02.p02/source/intercoms/src/G4UIbatch.cc:170 #9 0x00007f4b533d89db in G4UIbatch::SessionStart() (this=0x4f53d20) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.5/geant4/geant4.10.02.p02/source/intercoms/src/G4UIbatch.cc:215 #10 0x00007f4b533fa0d3 in G4UImanager::ExecuteMacroFile(char const*) (this=this entry=0x272e7e0, fileName=0x4f53d08 "run.mac") at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.5/geant4/geant4.10.02.p02/source/intercoms/src/G4UImanager.cc:296 #11 0x00007f4b533f0529 in G4UIcontrolMessenger::SetNewValue(G4UIcommand*, G4String) (this=0x272ebf0, command=command entry=0x272f2f0, newValue=...) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.5/geant4/geant4.10.02.p02/source/intercoms/src/G4UIcontrolMessenger.cc:313 #12 0x00007f4b533e6d45 in G4UIcommand::DoIt(G4String) (this=this entry=0x272f2f0, parameterList=...) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.5/geant4/geant4.10.02.p02/source/intercoms/src/G4UIcommand.cc:230 #13 0x00007f4b533fee28 in G4UImanager::ApplyCommand(char const*) (this=this entry=0x272e7e0, aCmd=) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.5/geant4/geant4.10.02.p02/source/intercoms/src/G4UImanager.cc:523 #14 0x00007f4b533ff8d8 in G4UImanager::ApplyCommand(G4String const&) (this=this entry=0x272e7e0, aCmd=...) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.5/geant4/geant4.10.02.p02/source/intercoms/src/G4UImanager.cc:441 #15 0x00007f4b59fbb94e in main(int, char**) (argc=2, argv=0x7ffea0ea13c8) at src/hdgeant4.cc:230 #16 0x00007f4b4811b555 in __libc_start_main () at /lib64/libc.so.6 #17 0x0000000000684697 in _start () =========================================================== The lines below might hint at the cause of the crash. You may get help by asking at the ROOT forum http://root.cern.ch/forum. Only if you are really convinced it is a bug in ROOT then please submit a report at http://root.cern.ch/bugs. Please post the ENTIRE stack trace from above as an attachment in addition to anything else that might help us fixing this issue. =========================================================== #6 0x00007f4b5ab69005 in GlueXPhotonBeamGenerator::GenerateTaggerHit(G4Event const*, double, double, int) (this=0x0, event=event entry=0x7f4b2d1e13b0, energy=1.2598673968951787e-321, time=9.532824124368238e-130, time entry=-8.0160320639999973, bg=bg entry=0) at src/GlueXPhotonBeamGenerator.cc:618 #7 0x00007f4b5ab83236 in GlueXPrimaryGeneratorAction::GeneratePrimariesHDDM(G4Event*) (this=0x7f4b381069b0, anEvent=0x7f4b2d1e13b0) at src/GlueXPrimaryGeneratorAction.cc:900 #8 0x00007f4b56c2d25d in G4WorkerRunManager::GenerateEvent(int) (this=0x7f4b38072970, i_event=) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.5/geant4/geant4.10.02.p02/source/run/src/G4WorkerRunManager.cc:376 #9 0x00007f4b56c2b28d in G4WorkerRunManager::ProcessOneEvent(int) (this=0x7f4b38072970, i_event=) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.5/geant4/geant4.10.02.p02/source/run/src/G4WorkerRunManager.cc:250 #10 0x00007f4b56c2b429 in G4WorkerRunManager::DoEventLoop(int, char const*, int) (this=0x7f4b38072970, n_event=100000, macroFile=0x0, n_select=-1) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.5/geant4/geant4.10.02.p02/source/run/src/G4WorkerRunManager.cc:231 #11 0x00007f4b56c1fa1e in G4RunManager::BeamOn(int, char const*, int) (this=0x7f4b38072970, n_event=100000, macroFile=0x0, n_select=-1) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.5/geant4/geant4.10.02.p02/source/run/src/G4RunManager.cc:273 #12 0x00007f4b56c2c1b1 in G4WorkerRunManager::DoWork() (this=0x7f4b38072970) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.5/geant4/geant4.10.02.p02/source/run/src/G4WorkerRunManager.cc:619 #13 0x00007f4b56c35e84 in G4MTRunManagerKernel::StartThread(void*) (context=) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.5/geant4/geant4.10.02.p02/source/run/src/G4MTRunManagerKernel.cc:191 #14 0x00007f4b4cf5eea5 in start_thread () at /lib64/libpthread.so.0 #15 0x00007f4b481f78dd in clone () at /lib64/libc.so.6 =========================================================== Running mcsmear ... mcsmear -PJANA:BATCH_MODE=1 -PTHREAD_TIMEOUT=500 hdgeant.hddm JANA >> Enabling z compression of output HDDM file stream (default) JANA >> Enabling CRC data integrity check in output HDDM file stream JANA >>Opening source "hdgeant.hddm" of type: HDDM JANA >>Launching threads . JANA >> THREAD_TIMEOUT_FIRST_EVENT is set smaller than THREAD_TIMEOUT JANA >> (30 < 500). THREAD_TIMEOUT_FIRST_EVENT will be set to 500 JANA >>Installing special signal handler for mcsmear... JANA >> JANA >>No more event sources JANA >>Thread 0x7f865e3e0700 completed gracefully: Thu Jul 23 08:03:22 2020 JANA >>Merging thread 0 (0x7f865e3e0700) ... Closed HDDM file 0 event written to hdgeant_smeared.hddm JANA >>Merging event reader thread ... JANA >> 0 events processed (0 events read) Average rate: 0.0Hz Running hd_root with danarest ... hd_root -PJANA:BATCH_MODE=1 --nthreads=1 -PTHREAD_TIMEOUT=500 -PPLUGINS=danarest hdgeant_smeared.hddm JANA >>OUTPUT_FILENAME: hd_root.root JANA >>Initializing plugin "/u/scratch/gluex/nightly/2020-07-23/Linux_RHEL7-x86_64-gcc4.8.5/halld_recon/Linux_RHEL7-x86_64-gcc4.8.5/plugins/danarest.so" ... Opened ROOT file "hd_root.root" ... JANA >>Opening source "hdgeant_smeared.hddm" of type: HDDM JANA >>Launching threads . JANA >> THREAD_TIMEOUT_FIRST_EVENT is set smaller than THREAD_TIMEOUT JANA >> (30 < 500). THREAD_TIMEOUT_FIRST_EVENT will be set to 500 JANA >> JANA >>No more event sources JANA >>Thread 0x7f37f61d8700 completed gracefully: Thu Jul 23 08:03:24 2020 JANA >>Merging thread 0 (0x7f37f61d8700) ... JANA >>Merging event reader thread ... JANA >> 0 events processed (0 events read) Average rate: 0.0Hz Closed ROOT file JANA >>Closing shared object handle 0 ... Running hd_root with b1pi_hists & monitoring_hists ... hd_root -PJANA:BATCH_MODE=1 --nthreads=1 -PTHREAD_TIMEOUT=500 -PPLUGINS=b1pi_hists,monitoring_hists dana_rest.hddm JANA >>OUTPUT_FILENAME: hd_root.root JANA >>Initializing plugin "/u/scratch/gluex/nightly/2020-07-23/Linux_RHEL7-x86_64-gcc4.8.5/halld_recon/Linux_RHEL7-x86_64-gcc4.8.5/plugins/b1pi_hists.so" ... JANA >>Initializing plugin "/u/scratch/gluex/nightly/2020-07-23/Linux_RHEL7-x86_64-gcc4.8.5/halld_recon/Linux_RHEL7-x86_64-gcc4.8.5/plugins/monitoring_hists.so" ... Opened ROOT file "hd_root.root" ... JANA ERROR>> JANA ERROR>> xxxxxxxxxxxx Unable to open event source "dana_rest.hddm"! xxxxxxxxxxxx JANA ERROR>> JANA ERROR>> xxxxxxxxxxxx NO VALID EVENT SOURCES GIVEN !!! JANA >> JANA >>Telling all threads to quit ... xxxxxxxxxxxx JANA ERROR>> JANA >>Launching threads . JANA >> THREAD_TIMEOUT_FIRST_EVENT is set smaller than THREAD_TIMEOUT JANA >> (30 < 500). THREAD_TIMEOUT_FIRST_EVENT will be set to 500 JANA >> JANA >>Telling all threads to quit ... JANA >>Merging event reader thread ... JANA >> 0 events processed (0 events read) Average rate: 0.0Hz Closed ROOT file Exit code: 66 JANA >>Closing shared object handle 0 ... JANA >>Closing shared object handle 1 ... Create plots root -b -q mk_pics.C ------------------------------------------------------------ | Welcome to ROOT 6.08/06 http://root.cern.ch | | (c) 1995-2016, The ROOT Team | | Built for linuxx8664gcc | | From tag v6-08-06, 2 March 2017 | | Try '.help', '.demo', '.license', '.credits', '.quit'/'.q' | ------------------------------------------------------------ Processing mk_pics.C... #0 0x00007f71811cf46c in waitpid () from /lib64/libc.so.6 #1 0x00007f718114cf62 in do_system () from /lib64/libc.so.6 #2 0x00007f71821d2b19 in TUnixSystem::StackTrace (this=0x1b568e0) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.5/root/root-6.08.06/core/unix/src/TUnixSystem.cxx:2405 #3 0x00007f717d6c7af5 in cling::MultiplexInterpreterCallbacks::PrintStackTrace() () from /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.5/root/root-6.08.06/lib/libCling.so #4 0x00007f717d6c7468 in cling_runtime_internal_throwIfInvalidPointer () from /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.5/root/root-6.08.06/lib/libCling.so #5 0x00007f718290b4ae in ?? () #6 0x00007ffd556eea70 in ?? () #7 0x00000000026e11a0 in ?? () #8 0x0000000000000000 in ?? () terminate called after throwing an instance of 'cling::InvalidDerefException' what(): Trying to dereference null pointer or trying to call routine taking non-null arguments Save test data python update_db.py Traceback (most recent call last): File "update_db.py", line 28, in with open("data.txt") as f: IOError: [Errno 2] No such file or directory: 'data.txt' #count events /group/halld/Software/hd_utilities/b1pi_test/b1pi_cron_one.sh: line 44: hddm_counter.pl: command not found #count b1_pi.hddm /group/halld/Software/hd_utilities/b1pi_test/b1pi_cron_one.sh: line 45: hddm_counter.pl: command not found #count hdgeant.hddm /group/halld/Software/hd_utilities/b1pi_test/b1pi_cron_one.sh: line 46: hddm_counter.pl: command not found #count hdgeant_smeared.hddm /group/halld/Software/hd_utilities/b1pi_test/b1pi_cron_one.sh: line 47: hddm_counter.pl: command not found #count dana_rest.hddm /group/halld/Software/hd_utilities/b1pi_test/b1pi_cron_one.sh: line 48: hddm_counter.pl: command not found #count dana_rest_b1pi.hddm mkdir: created directory ‘/group/halld/www/halldweb/html/b1pi/2020-07-23/Linux_RHEL7-x86_64-gcc4.8.5/Run30480’ cp: cannot stat ‘*.pdf’: No such file or directory cp: cannot stat ‘*.gif’: No such file or directory ‘index.html’ -> ‘/group/halld/www/halldweb/html/b1pi/2020-07-23/Linux_RHEL7-x86_64-gcc4.8.5/Run30480/index.html’