Pseudo-terminal will not be allocated because stdin is not a terminal. Error in gluex_env_version.sh: version xml file /u/scratch/gluex/nightly/2019-02-11/Linux_RHEL7-x86_64-gcc4.8.5/version_2019-02-11.xml not found, environment settings not done mkdir: created directory ‘/u/scratch/gluex/b1pi/2019-02-11/Linux_RHEL7-x86_64-gcc4.8.5’ mkdir: created directory ‘/u/scratch/gluex/b1pi/2019-02-11/Linux_RHEL7-x86_64-gcc4.8.5/11366’ info: number of threads not defined, using default value 1 info: vertex parameters not defined, using default values 0 0 50 80 NEVENTS = 30000 VERTEX = 0 0 50 80 NTHREADS = 1 B1PI_TEST_DIR = /group/halld/Software/scripts/b1pi_test RUN = 11366 Copying script files and macros ... ‘/group/halld/Software/scripts/b1pi_test/b1pi_cron_one.sh’ -> ‘./b1pi_cron_one.sh’ ‘/group/halld/Software/scripts/b1pi_test/b1pi_cron.sh’ -> ‘./b1pi_cron.sh’ ‘/group/halld/Software/scripts/b1pi_test/b1_pi.input’ -> ‘./b1_pi.input’ ‘/group/halld/Software/scripts/b1pi_test/b1pi_message.sh’ -> ‘./b1pi_message.sh’ ‘/group/halld/Software/scripts/b1pi_test/b1pi_test.sh’ -> ‘./b1pi_test.sh’ ‘/group/halld/Software/scripts/b1pi_test/hddm_counter.pl’ -> ‘./hddm_counter.pl’ ‘/group/halld/Software/scripts/b1pi_test/index.html’ -> ‘./index.html’ cp: omitting directory ‘/group/halld/Software/scripts/b1pi_test/macros’ ‘/group/halld/Software/scripts/b1pi_test/my_b1pi_test.sh’ -> ‘./my_b1pi_test.sh’ ‘/group/halld/Software/scripts/b1pi_test/README’ -> ‘./README’ ‘/group/halld/Software/scripts/b1pi_test/macros/anal1.C’ -> ‘./anal1.C’ ‘/group/halld/Software/scripts/b1pi_test/macros/b1_pi.C’ -> ‘./b1_pi.C’ ‘/group/halld/Software/scripts/b1pi_test/macros/b1pi_gen.C’ -> ‘./b1pi_gen.C’ ‘/group/halld/Software/scripts/b1pi_test/macros/b1pi_gen.h’ -> ‘./b1pi_gen.h’ ‘/group/halld/Software/scripts/b1pi_test/macros/b1_pi.h’ -> ‘./b1_pi.h’ ‘/group/halld/Software/scripts/b1pi_test/macros/b1pi_rec.C’ -> ‘./b1pi_rec.C’ ‘/group/halld/Software/scripts/b1pi_test/macros/b1pi_rec.h’ -> ‘./b1pi_rec.h’ ‘/group/halld/Software/scripts/b1pi_test/macros/fit_voigt.C’ -> ‘./fit_voigt.C’ ‘/group/halld/Software/scripts/b1pi_test/macros/makeallplots.C’ -> ‘./makeallplots.C’ ‘/group/halld/Software/scripts/b1pi_test/macros/mass_X.C’ -> ‘./mass_X.C’ ‘/group/halld/Software/scripts/b1pi_test/macros/mk_pics.C’ -> ‘./mk_pics.C’ ‘/group/halld/Software/scripts/b1pi_test/macros/momentum.C’ -> ‘./momentum.C’ ‘/group/halld/Software/scripts/b1pi_test/macros/StandardLabels.C’ -> ‘./StandardLabels.C’ ‘/group/halld/Software/scripts/b1pi_test/macros/theta.C’ -> ‘./theta.C’ ‘/group/halld/Software/scripts/b1pi_test/macros/update_db.py’ -> ‘./update_db.py’ Running genr8 ... /group/halld/Software/scripts/b1pi_test/b1pi_test.sh: line 98: genr8: command not found Converting generated events to HDDM ... /group/halld/Software/scripts/b1pi_test/b1pi_test.sh: line 101: genr8_2_hddm: command not found Creating control.in file ... Running hdgeant ... /group/halld/Software/scripts/b1pi_test/b1pi_test.sh: line 115: hdgeant: command not found Running mcsmear ... /group/halld/Software/scripts/b1pi_test/b1pi_test.sh: line 118: mcsmear: command not found Running hd_root with danarest ... /group/halld/Software/scripts/b1pi_test/b1pi_test.sh: line 121: hd_root: command not found Running hd_root with b1pi_hists & monitoring_hists ... /group/halld/Software/scripts/b1pi_test/b1pi_test.sh: line 124: hd_root: command not found Create plots ------------------------------------------------------------ | Welcome to ROOT 6.14/08 http://root.cern.ch | | (c) 1995-2018, The ROOT Team | | Built for linuxx8664gcc | | From tags/v6-14-08@v6-14-08, Nov 22 2018, 08:48:56 | | Try '.help', '.demo', '.license', '.credits', '.quit'/'.q' | ------------------------------------------------------------ Processing mk_pics.C... Error in : file hd_root.root does not exist #0 0x00007f50df933a3c in waitpid () from /lib64/libc.so.6 #1 0x00007f50df8b1de2 in do_system () from /lib64/libc.so.6 #2 0x00007f50e04921b4 in TUnixSystem::StackTrace() () from /usr/lib64/root/libCore.so.6.14 #3 0x00007f50da832705 in cling::MultiplexInterpreterCallbacks::PrintStackTrace() () from /usr/lib64/root/libCling.so #4 0x00007f50da831c3b in cling_runtime_internal_throwIfInvalidPointer () from /usr/lib64/root/libCling.so #5 0x00007f50e0b0313b in ?? () #6 0x00007fff67d09420 in ?? () #7 0x00007f50e0b04b08 in ?? () #8 0x00000000028e9ba0 in ?? () #9 0x00007f50da88ce1b in cling::IncrementalExecutor::runStaticInitializersOnce(cling::Transaction const&) () from /usr/lib64/root/libCling.so #10 0x00007f50da836127 in cling::Interpreter::executeTransaction(cling::Transaction&) () from /usr/lib64/root/libCling.so #11 0x00007f50da8993fa in cling::IncrementalParser::commitTransaction(llvm::PointerIntPair, llvm::PointerIntPairInfo > >&, bool) () from /usr/lib64/root/libCling.so #12 0x00007f50da89c125 in cling::IncrementalParser::Compile(llvm::StringRef, cling::CompilationOptions const&) () from /usr/lib64/root/libCling.so #13 0x00007f50da834643 in cling::Interpreter::EvaluateInternal(std::string const&, cling::CompilationOptions, cling::Value*, cling::Transaction**, unsigned long) () from /usr/lib64/root/libCling.so #14 0x00007f50da834946 in cling::Interpreter::process(std::string const&, cling::Value*, cling::Transaction**, bool) () from /usr/lib64/root/libCling.so #15 0x00007f50da8cee0f in cling::MetaProcessor::readInputFromFile(llvm::StringRef, cling::Value*, unsigned long, bool) () from /usr/lib64/root/libCling.so #16 0x00007f50da7c15a1 in TCling::ProcessLine(char const*, TInterpreter::EErrorCode*) () from /usr/lib64/root/libCling.so #17 0x00007f50da7b09eb in TCling::ProcessLineSynch(char const*, TInterpreter::EErrorCode*) () from /usr/lib64/root/libCling.so #18 0x00007f50e0358d9c in TApplication::ExecuteFile(char const*, int*, bool) () from /usr/lib64/root/libCore.so.6.14 #19 0x00007f50e03582b2 in TApplication::ProcessLine(char const*, bool, int*) () from /usr/lib64/root/libCore.so.6.14 #20 0x00007f50e07c2e65 in TRint::ProcessLineNr(char const*, char const*, int*) () from /usr/lib64/root/libRint.so.6.14 #21 0x00007f50e07c4648 in TRint::Run(bool) () from /usr/lib64/root/libRint.so.6.14 #22 0x00000000004008aa in main () terminate called after throwing an instance of 'cling::InvalidDerefException' what(): Trying to dereference null pointer or trying to call routine taking non-null arguments Save test data File "update_db.py", line 10 print "Could not find run number! Exiting..." ^ SyntaxError: Missing parentheses in call to 'print' #count events sh: hddm-xml: command not found #count b1_pi.hddm 0 sh: hddm-xml: command not found #count hdgeant.hddm 0 sh: hddm-xml: command not found #count hdgeant_smeared.hddm 0 sh: hddm-xml: command not found #count dana_rest.hddm 0 sh: hddm-xml: command not found #count dana_rest_b1pi.hddm 0 mkdir: created directory ‘/group/halld/www/halldweb/html/b1pi/2019-02-11/Linux_RHEL7-x86_64-gcc4.8.5’ mkdir: created directory ‘/group/halld/www/halldweb/html/b1pi/2019-02-11/Linux_RHEL7-x86_64-gcc4.8.5/Run11366’ cp: cannot stat ‘*.pdf’: No such file or directory cp: cannot stat ‘*.gif’: No such file or directory ‘index.html’ -> ‘/group/halld/www/halldweb/html/b1pi/2019-02-11/Linux_RHEL7-x86_64-gcc4.8.5/Run11366/index.html’ mkdir: created directory ‘/u/scratch/gluex/b1pi/2019-02-11/Linux_RHEL7-x86_64-gcc4.8.5/30480’ info: number of threads not defined, using default value 1 info: vertex parameters not defined, using default values 0 0 50 80 NEVENTS = 30000 VERTEX = 0 0 50 80 NTHREADS = 1 B1PI_TEST_DIR = /group/halld/Software/scripts/b1pi_test RUN = 30480 Copying script files and macros ... ‘/group/halld/Software/scripts/b1pi_test/b1pi_cron_one.sh’ -> ‘./b1pi_cron_one.sh’ ‘/group/halld/Software/scripts/b1pi_test/b1pi_cron.sh’ -> ‘./b1pi_cron.sh’ ‘/group/halld/Software/scripts/b1pi_test/b1_pi.input’ -> ‘./b1_pi.input’ ‘/group/halld/Software/scripts/b1pi_test/b1pi_message.sh’ -> ‘./b1pi_message.sh’ ‘/group/halld/Software/scripts/b1pi_test/b1pi_test.sh’ -> ‘./b1pi_test.sh’ ‘/group/halld/Software/scripts/b1pi_test/hddm_counter.pl’ -> ‘./hddm_counter.pl’ ‘/group/halld/Software/scripts/b1pi_test/index.html’ -> ‘./index.html’ cp: omitting directory ‘/group/halld/Software/scripts/b1pi_test/macros’ ‘/group/halld/Software/scripts/b1pi_test/my_b1pi_test.sh’ -> ‘./my_b1pi_test.sh’ ‘/group/halld/Software/scripts/b1pi_test/README’ -> ‘./README’ ‘/group/halld/Software/scripts/b1pi_test/macros/anal1.C’ -> ‘./anal1.C’ ‘/group/halld/Software/scripts/b1pi_test/macros/b1_pi.C’ -> ‘./b1_pi.C’ ‘/group/halld/Software/scripts/b1pi_test/macros/b1pi_gen.C’ -> ‘./b1pi_gen.C’ ‘/group/halld/Software/scripts/b1pi_test/macros/b1pi_gen.h’ -> ‘./b1pi_gen.h’ ‘/group/halld/Software/scripts/b1pi_test/macros/b1_pi.h’ -> ‘./b1_pi.h’ ‘/group/halld/Software/scripts/b1pi_test/macros/b1pi_rec.C’ -> ‘./b1pi_rec.C’ ‘/group/halld/Software/scripts/b1pi_test/macros/b1pi_rec.h’ -> ‘./b1pi_rec.h’ ‘/group/halld/Software/scripts/b1pi_test/macros/fit_voigt.C’ -> ‘./fit_voigt.C’ ‘/group/halld/Software/scripts/b1pi_test/macros/makeallplots.C’ -> ‘./makeallplots.C’ ‘/group/halld/Software/scripts/b1pi_test/macros/mass_X.C’ -> ‘./mass_X.C’ ‘/group/halld/Software/scripts/b1pi_test/macros/mk_pics.C’ -> ‘./mk_pics.C’ ‘/group/halld/Software/scripts/b1pi_test/macros/momentum.C’ -> ‘./momentum.C’ ‘/group/halld/Software/scripts/b1pi_test/macros/StandardLabels.C’ -> ‘./StandardLabels.C’ ‘/group/halld/Software/scripts/b1pi_test/macros/theta.C’ -> ‘./theta.C’ ‘/group/halld/Software/scripts/b1pi_test/macros/update_db.py’ -> ‘./update_db.py’ Running genr8 ... /group/halld/Software/scripts/b1pi_test/b1pi_test.sh: line 98: genr8: command not found Converting generated events to HDDM ... /group/halld/Software/scripts/b1pi_test/b1pi_test.sh: line 101: genr8_2_hddm: command not found Creating control.in file ... Running hdgeant ... /group/halld/Software/scripts/b1pi_test/b1pi_test.sh: line 115: hdgeant: command not found Running mcsmear ... /group/halld/Software/scripts/b1pi_test/b1pi_test.sh: line 118: mcsmear: command not found Running hd_root with danarest ... /group/halld/Software/scripts/b1pi_test/b1pi_test.sh: line 121: hd_root: command not found Running hd_root with b1pi_hists & monitoring_hists ... /group/halld/Software/scripts/b1pi_test/b1pi_test.sh: line 124: hd_root: command not found Create plots ------------------------------------------------------------ | Welcome to ROOT 6.14/08 http://root.cern.ch | | (c) 1995-2018, The ROOT Team | | Built for linuxx8664gcc | | From tags/v6-14-08@v6-14-08, Nov 22 2018, 08:48:56 | | Try '.help', '.demo', '.license', '.credits', '.quit'/'.q' | ------------------------------------------------------------ Processing mk_pics.C... Error in : file hd_root.root does not exist #0 0x00007f3292c27a3c in waitpid () from /lib64/libc.so.6 #1 0x00007f3292ba5de2 in do_system () from /lib64/libc.so.6 #2 0x00007f32937861b4 in TUnixSystem::StackTrace() () from /usr/lib64/root/libCore.so.6.14 #3 0x00007f328db26705 in cling::MultiplexInterpreterCallbacks::PrintStackTrace() () from /usr/lib64/root/libCling.so #4 0x00007f328db25c3b in cling_runtime_internal_throwIfInvalidPointer () from /usr/lib64/root/libCling.so #5 0x00007f3293df713b in ?? () #6 0x00007ffc32146e80 in ?? () #7 0x00007f3293df8b08 in ?? () #8 0x0000000001f9fba0 in ?? () #9 0x00007f328db80e1b in cling::IncrementalExecutor::runStaticInitializersOnce(cling::Transaction const&) () from /usr/lib64/root/libCling.so #10 0x00007f328db2a127 in cling::Interpreter::executeTransaction(cling::Transaction&) () from /usr/lib64/root/libCling.so #11 0x00007f328db8d3fa in cling::IncrementalParser::commitTransaction(llvm::PointerIntPair, llvm::PointerIntPairInfo > >&, bool) () from /usr/lib64/root/libCling.so #12 0x00007f328db90125 in cling::IncrementalParser::Compile(llvm::StringRef, cling::CompilationOptions const&) () from /usr/lib64/root/libCling.so #13 0x00007f328db28643 in cling::Interpreter::EvaluateInternal(std::string const&, cling::CompilationOptions, cling::Value*, cling::Transaction**, unsigned long) () from /usr/lib64/root/libCling.so #14 0x00007f328db28946 in cling::Interpreter::process(std::string const&, cling::Value*, cling::Transaction**, bool) () from /usr/lib64/root/libCling.so #15 0x00007f328dbc2e0f in cling::MetaProcessor::readInputFromFile(llvm::StringRef, cling::Value*, unsigned long, bool) () from /usr/lib64/root/libCling.so #16 0x00007f328dab55a1 in TCling::ProcessLine(char const*, TInterpreter::EErrorCode*) () from /usr/lib64/root/libCling.so #17 0x00007f328daa49eb in TCling::ProcessLineSynch(char const*, TInterpreter::EErrorCode*) () from /usr/lib64/root/libCling.so #18 0x00007f329364cd9c in TApplication::ExecuteFile(char const*, int*, bool) () from /usr/lib64/root/libCore.so.6.14 #19 0x00007f329364c2b2 in TApplication::ProcessLine(char const*, bool, int*) () from /usr/lib64/root/libCore.so.6.14 #20 0x00007f3293ab6e65 in TRint::ProcessLineNr(char const*, char const*, int*) () from /usr/lib64/root/libRint.so.6.14 #21 0x00007f3293ab8648 in TRint::Run(bool) () from /usr/lib64/root/libRint.so.6.14 #22 0x00000000004008aa in main () terminate called after throwing an instance of 'cling::InvalidDerefException' what(): Trying to dereference null pointer or trying to call routine taking non-null arguments Save test data File "update_db.py", line 10 print "Could not find run number! Exiting..." ^ SyntaxError: Missing parentheses in call to 'print' #count events sh: hddm-xml: command not found #count b1_pi.hddm 0 sh: hddm-xml: command not found #count hdgeant.hddm 0 sh: hddm-xml: command not found #count hdgeant_smeared.hddm 0 sh: hddm-xml: command not found #count dana_rest.hddm 0 sh: hddm-xml: command not found #count dana_rest_b1pi.hddm 0 mkdir: created directory ‘/group/halld/www/halldweb/html/b1pi/2019-02-11/Linux_RHEL7-x86_64-gcc4.8.5/Run30480’ cp: cannot stat ‘*.pdf’: No such file or directory cp: cannot stat ‘*.gif’: No such file or directory ‘index.html’ -> ‘/group/halld/www/halldweb/html/b1pi/2019-02-11/Linux_RHEL7-x86_64-gcc4.8.5/Run30480/index.html’