Pseudo-terminal will not be allocated because stdin is not a terminal. mkdir: created directory `/u/scratch/gluex/b1pi/2017-10-05/Linux_CentOS6-x86_64-gcc4.9.2' info: number of threads not defined, using default value 1 info: vertex parameters not defined, using default values 0 0 50 80 NEVENTS = 150000 VERTEX = 0 0 50 80 NTHREADS = 1 B1PI_TEST_DIR = /group/halld/Software/scripts/b1pi_test Copying script files and macros ... `/group/halld/Software/scripts/b1pi_test/b1pi_cron_one.sh' -> `./b1pi_cron_one.sh' `/group/halld/Software/scripts/b1pi_test/b1pi_cron.sh' -> `./b1pi_cron.sh' `/group/halld/Software/scripts/b1pi_test/b1_pi.input' -> `./b1_pi.input' `/group/halld/Software/scripts/b1pi_test/b1pi_message.sh' -> `./b1pi_message.sh' `/group/halld/Software/scripts/b1pi_test/b1pi_test.sh' -> `./b1pi_test.sh' `/group/halld/Software/scripts/b1pi_test/hddm_counter.pl' -> `./hddm_counter.pl' `/group/halld/Software/scripts/b1pi_test/index.html' -> `./index.html' cp: omitting directory `/group/halld/Software/scripts/b1pi_test/macros' `/group/halld/Software/scripts/b1pi_test/my_b1pi_test.sh' -> `./my_b1pi_test.sh' `/group/halld/Software/scripts/b1pi_test/README' -> `./README' `/group/halld/Software/scripts/b1pi_test/macros/anal1.C' -> `./anal1.C' `/group/halld/Software/scripts/b1pi_test/macros/b1_pi.C' -> `./b1_pi.C' `/group/halld/Software/scripts/b1pi_test/macros/b1pi_gen.C' -> `./b1pi_gen.C' `/group/halld/Software/scripts/b1pi_test/macros/b1pi_gen.h' -> `./b1pi_gen.h' `/group/halld/Software/scripts/b1pi_test/macros/b1_pi.h' -> `./b1_pi.h' `/group/halld/Software/scripts/b1pi_test/macros/b1pi_rec.C' -> `./b1pi_rec.C' `/group/halld/Software/scripts/b1pi_test/macros/b1pi_rec.h' -> `./b1pi_rec.h' `/group/halld/Software/scripts/b1pi_test/macros/fit_voigt.C' -> `./fit_voigt.C' `/group/halld/Software/scripts/b1pi_test/macros/makeallplots.C' -> `./makeallplots.C' `/group/halld/Software/scripts/b1pi_test/macros/mass_X.C' -> `./mass_X.C' `/group/halld/Software/scripts/b1pi_test/macros/mk_pics.C' -> `./mk_pics.C' `/group/halld/Software/scripts/b1pi_test/macros/momentum.C' -> `./momentum.C' `/group/halld/Software/scripts/b1pi_test/macros/StandardLabels.C' -> `./StandardLabels.C' `/group/halld/Software/scripts/b1pi_test/macros/theta.C' -> `./theta.C' Running genr8 ... Using runNo: 1501 Maximum number of events: 150000 Opening file b1_pi.ascii for output. Reading: beamp.x beamp.y beamp.z beamMass Found: 0.000000 0.000000 9.000000 0.000000 Reading: targetp.x targetp.y targetp.z targetMass Found: 0.000000 0.000000 0.000000 0.938000 Reading: t-channelSlope Found: 5.000000 Reading: number of particles need to describe the decay Found: 12 Reading: part# chld1# chld2# prnt# Id nchld mass width chrg flag Found: 0 -1 -1 -1 14 0 0.938000 0.000000 1 11 Found: 1 2 3 -1 0 2 2.000000 0.100000 1 0 Found: 2 4 5 1 0 2 1.235000 0.142000 1 0 Found: 3 4 5 1 9 0 0.140000 0.000000 -1 11 Found: 4 6 7 2 0 2 0.783000 0.009000 0 0 Found: 5 6 7 2 8 0 0.140000 0.000000 1 11 Found: 6 8 9 4 0 2 0.776000 0.150000 0 0 Found: 7 10 11 4 7 2 0.135000 0.000000 0 0 Found: 8 10 11 6 8 0 0.140000 0.000000 1 11 Found: 9 10 11 6 9 0 0.140000 0.000000 -1 11 Found: 10 10 11 7 1 0 0.000000 0.000000 0 11 Found: 11 10 11 7 1 0 0.000000 0.000000 0 11 Found EOI---- Input File appears Fine. Calculating Lorentz Factor: 9000 Calculating Lorentz Factor: 8000 Calculating Lorentz Factor: 7000 Calculating Lorentz Factor: 6000 Calculating Lorentz Factor: 5000 Calculating Lorentz Factor: 4000 Calculating Lorentz Factor: 3000 Calculating Lorentz Factor: 2000 Calculating Lorentz Factor: 1000 Calculating Lorentz Factor: 100 Calculating Lorentz Factor: 90 Calculating Lorentz Factor: 80 Calculating Lorentz Factor: 70 Calculating Lorentz Factor: 60 Calculating Lorentz Factor: 50 Calculating Lorentz Factor: 40 Calculating Lorentz Factor: 30 Calculating Lorentz Factor: 20 Calculating Lorentz Factor: 10 Calculating Lorentz Factor: 0 Events generated: 100 Events accepted: 39 Events generated: 200 Events accepted: 92 Events generated: 300 Events accepted: 136 Events generated: 400 Events accepted: 182 Events generated: 500 Events accepted: 229 Events generated: 600 Events accepted: 276 Events generated: 700 Events accepted: 331 Events generated: 800 Events accepted: 386 Events generated: 900 Events accepted: 433 Events generated: 1000 Events accepted: 484 Events generated: 10000 Events accepted: 4930 Events generated: 20000 Events accepted: 9975 Events generated: 30000 Events accepted: 14991 Events generated: 40000 Events accepted: 20008 Events generated: 50000 Events accepted: 25034 Events generated: 60000 Events accepted: 30056 Events generated: 70000 Events accepted: 35117 Events generated: 80000 Events accepted: 40237 Events generated: 90000 Events accepted: 45318 Events generated: 100000 Events accepted: 50238 Events generated: 110000 Events accepted: 55289 Events generated: 120000 Events accepted: 60310 Events generated: 130000 Events accepted: 65241 Events generated: 140000 Events accepted: 70132 Events generated: 150000 Events accepted: 75188 Events generated: 160000 Events accepted: 80137 Events generated: 170000 Events accepted: 85174 Events generated: 180000 Events accepted: 90125 Events generated: 190000 Events accepted: 95129 Events generated: 200000 Events accepted: 100158 Events generated: 210000 Events accepted: 105243 Events generated: 220000 Events accepted: 110286 Events generated: 230000 Events accepted: 115248 Events generated: 240000 Events accepted: 120358 Events generated: 250000 Events accepted: 125445 Events generated: 260000 Events accepted: 130523 Events generated: 270000 Events accepted: 135503 Events generated: 280000 Events accepted: 140498 Events generated: 290000 Events accepted: 145465 Max Lorentz Factor:0.001194 Events generated:298926 Events accepted:150000 Setting random number seed to: 1507251702 Converting generated events to HDDM ... Wrote event 1000 Wrote event 2000 Wrote event 3000 Wrote event 4000 Wrote event 5000 Wrote event 6000 Wrote event 7000 Wrote event 8000 Wrote event 9000 Wrote event 10000 Wrote event 11000 Wrote event 12000 Wrote event 13000 Wrote event 14000 Wrote event 15000 Wrote event 16000 Wrote event 17000 Wrote event 18000 Wrote event 19000 Wrote event 20000 Wrote event 21000 Wrote event 22000 Wrote event 23000 Wrote event 24000 Wrote event 25000 Wrote event 26000 Wrote event 27000 Wrote event 28000 Wrote event 29000 Wrote event 30000 Wrote event 31000 Wrote event 32000 Wrote event 33000 Wrote event 34000 Wrote event 35000 Wrote event 36000 Wrote event 37000 Wrote event 38000 Wrote event 39000 Wrote event 40000 Wrote event 41000 Wrote event 42000 Wrote event 43000 Wrote event 44000 Wrote event 45000 Wrote event 46000 Wrote event 47000 Wrote event 48000 Wrote event 49000 Wrote event 50000 Wrote event 51000 Wrote event 52000 Wrote event 53000 Wrote event 54000 Wrote event 55000 Wrote event 56000 Wrote event 57000 Wrote event 58000 Wrote event 59000 Wrote event 60000 Wrote event 61000 Wrote event 62000 Wrote event 63000 Wrote event 64000 Wrote event 65000 Wrote event 66000 Wrote event 67000 Wrote event 68000 Wrote event 69000 Wrote event 70000 Wrote event 71000 Wrote event 72000 Wrote event 73000 Wrote event 74000 Wrote event 75000 Wrote event 76000 Wrote event 77000 Wrote event 78000 Wrote event 79000 Wrote event 80000 Wrote event 81000 Wrote event 82000 Wrote event 83000 Wrote event 84000 Wrote event 85000 Wrote event 86000 Wrote event 87000 Wrote event 88000 Wrote event 89000 Wrote event 90000 Wrote event 91000 Wrote event 92000 Wrote event 93000 Wrote event 94000 Wrote event 95000 Wrote event 96000 Wrote event 97000 Wrote event 98000 Wrote event 99000 Wrote event 100000 Wrote event 101000 Wrote event 102000 Wrote event 103000 Wrote event 104000 Wrote event 105000 Wrote event 106000 Wrote event 107000 Wrote event 108000 Wrote event 109000 Wrote event 110000 Wrote event 111000 Wrote event 112000 Wrote event 113000 Wrote event 114000 Wrote event 115000 Wrote event 116000 Wrote event 117000 Wrote event 118000 Wrote event 119000 Wrote event 120000 Wrote event 121000 Wrote event 122000 Wrote event 123000 Wrote event 124000 Wrote event 125000 Wrote event 126000 Wrote event 127000 Wrote event 128000 Wrote event 129000 Wrote event 130000 Wrote event 131000 Wrote event 132000 Wrote event 133000 Wrote event 134000 Wrote event 135000 Wrote event 136000 Wrote event 137000 Wrote event 138000 Wrote event 139000 Wrote event 140000 Wrote event 141000 Wrote event 142000 Wrote event 143000 Wrote event 144000 Wrote event 145000 Wrote event 146000 Wrote event 147000 Wrote event 148000 Wrote event 149000 Wrote event 150000 Wrote 150000 events to b1_pi.hddm Creating control.in file ... Running hdgeant ... MZSTOR. ZEBRA table base TAB(0) in /MZCC/ at adr 18528351 11AB85F HEX MZSTOR. Initialize Store 0 in /GCBANK/ with Store/Table at absolute adrs 12965941 18528351 HEX C5D835 11AB85F HEX FFAB1DF2 0 relative adrs -5562894 0 with 1 Str. in 2 Links in 5300 Low words in 4999970 words. This store has a fence of 16 words. MZLOGL. Set Log Level 0 for store 0 MZSTOR. Initialize Store 1 in /PAWC/ with Store/Table at absolute adrs 7965929 12965520 HEX 798CE9 C5D690 HEX FF5ED2A6 FFAB1E31 relative adrs -10562906 -5562831 with 1 Str. in 1 Links in 5001 Low words in 4999990 words. This store has a fence of 5 words. MZLINK. Initialize Link Area /HCBOOK/ for Store 1 NL/NS= 49 4 MZDIV. Initialize Division HIGZ in Store 1 NW/NWMAX= 10005000000, MODE/KIND= 0 3 Division 20 initialized. MZLINK. Initialize Link Area /HILINK/ for Store 1 NL/NS= 42 2 Version 1.29/04 of HIGZ started 1***** GEANT Version 3.21/14 Released on 19032002 0***** Correction Cradle Version 0.1400 MODE VERSION 1.00 : MZDIV. Initialize Division Constant in Store 0 NW/NWMAX= 20004000000, MODE/KIND= 1 2 Division 20 initialized. MZLINK. Initialize Link Area /GCLINK/ for Store 0 NL/NS= 20 20 MZLINK. Initialize Link Area /GCSLNK/ for Store 0 NL/NS= 100 100 run number 1501 0 JANA >>Created JCalibration object of type: JCalibrationCCDB JANA >>Generated via: JCalibration using CCDB for MySQL and SQLite databases JANA >>Run:1501 JANA >>URL: mysql://ccdb_user@hallddb.jlab.org/ccdb JANA >>context: variation=mc JANA >>comment: Variation for simulations with data conditions JANA >>Reading Magnetic field map from Magnets/Solenoid/solenoid_1200A_poisson_20140520 ... Nx=251 Ny=1 Nz=701 ) at 0x5cc5670 Reading fine-mesh B-field data from /group/halld/www/halldweb/html/resources/Magnets/Solenoid/finemeshes/solenoid_1200A_poisson_20140520.evio rmin: 0 rmax: 88.5 dr: 0.1 zmin: 0 zmax: 600 dz: 0.1 Number of points in z = 6000 Number of points in r = 885 JANA >>175951 entries found (Creating DGeometry: JANA >> Run requested:1501 found:1501 JANA >> Run validity range: 1501-1501 JANA >> URL="xmlfile:///u/scratch/gluex/nightly/2017-10-05/Linux_CentOS6-x86_64-gcc4.9.2/hdds/main_HDDS.xml" context="default" JANA >> Type="JGeometryXML" JANA >>Found 22 material maps in calib. DB JANA >>Read in 22 material maps for run 1501 containing 75673 grid points total JANA >> JANA >>Reading Pair Spectrometer Magnetic field map from Magnets/PairSpectrometer/PS_1.8T_20150513_test ... Nx=40 Ny=1 Nz=121 ) at 0x5d1d3c0 RZOPEN. record length: 65536 > maximum safe value (8191 words). RZOPEN. Automatic record length determination will not work with this file. RZOPEN. You may have problems transferring your file to other systems or writing it to tape. RZMAKE. Unit 1011 Initializing with LREC= 65536, OPT= X?C MZLINK. Initialize Link Area RZCL for Store 0 NL/NS= 11 0 MZLINK. Initialize Link Area /GCHVIR/ for Store 0 NL/NS= 4 1 MZLINK. Initialize Link Area /GCDINA/ for Store 0 NL/NS= 4 4 1************************************************************ * * * G E A N T Version 3.2114 DATE/TIME 171005/0800 * * * * R U N 1501 * * * ************************************************************ * * * Data structure Date Time GVERSN ZVERSN * * -------------- ---- ---- ------ ------ * * * * INIT 171005 0800 3.2114 3.79 * * * * KINE 171005 0800 3.2114 3.79 * * * * HITS 171005 0800 3.2114 3.79 * * * * DIGI 171005 0800 3.2114 3.79 * * * * Random number seeds: 1315342834 425995190 * * -------------------- * * * *----------------------------------------------------------* * * * Standard TPAR for this run are * * ------------------------------ * * * * CUTGAM= 1.00 MeV CUTELE= 1.00 MeV CUTNEU= 10.00 MeV * * CUTHAD= 10.00 MeV CUTMUO= 10.00 MeV * * BCUTE = 1.00 MeV BCUTM = 1.00 MeV * * DCUTE = 1.00 MeV DCUTM = 1.00 MeV PPCUTM= 10.00 MeV * * IPAIR = 1. ICOMP = 1. IPHOT = 1. * * IPFIS = 0. IDRAY = 1. IANNI = 1. * * IBREM = 1. IHADR = 1. IMUNU = 1. * * IDCAY = 1. ILOSS = 1. IMULS = 1. * * IRAYL = 0. ILABS = 0. ISYNC = 0. * * ISTRA = 0. * * * * * ************************************************************ RZMAKE. Unit 3 Initializing with LREC= 1024, OPT= ON X RZMAKE. new RZ format selected. This file will not be readable with versions of RZ prior to release 94B *** GROUT *** Data structure DRAW version 1 saved to disk *** GROUT *** Data structure MATE version 1 saved to disk *** GROUT *** Data structure PART version 1 saved to disk *** GROUT *** Data structure ROTM version 1 saved to disk *** GROUT *** Data structure RUNG version 1 saved to disk *** GROUT *** Data structure SETS was not found *** GROUT *** Data structure TMED version 1 saved to disk *** GROUT *** Data structure VOLU version 1 saved to disk *** GROUT *** Data structure SCAN was not found RZEND. called for LUN3 settofg: beam_bucket_period_ns set to 2.00400805 ns 0 events simulated settofg: RF reference plane set to 65.0000000 cm TAGGER: ALL parameters loaded from Data Base START: ALL parameters loaded from Data Base CDC: ALL parameters loaded from Data Base BCAL/bcal_parms: ALL parameters loaded from Data Base BCAL/mc_parms: ALL parameters loaded from Data Base FDC: ALL parameters loaded from Data Base FCAL: ALL parameters loaded from Data Base TOF: ALL parameters loaded from Data Base 10 events simulated 20 events simulated 30 events simulated WARNING: The BCAL records information about certain particles entering it so that information can be used later in mcsmear to properly smear the signals. For this event, more than the maximum number of incident particles has occurred (100) so the list is being truncated to the first 100. All of the signal in the BCAL is still being recorded, but the smearing may be off by a few percent for this event. It is probably nothing to worry about. This long message will only appear once and the following line just once per event whenever this occurs. programs/Simulation/HDGeant/hitBCal.cc:371 too many particles entering BCAL! Some information will be lost. 40 events simulated 50 events simulated 60 events simulated 70 events simulated 80 events simulated 90 events simulated 100 events simulated 200 events simulated 300 events simulated 400 events simulated 500 events simulated 600 events simulated 700 events simulated Warning in savehits: unsaved hit information found from sensitive volume FDA2, hit discarded. 800 events simulated 900 events simulated 1000 events simulated 2000 events simulated 3000 events simulated 4000 events simulated 5000 events simulated 6000 events simulated Warning in savehits: unsaved hit information found from sensitive volume FDA3, hit discarded. 7000 events simulated Warning in savehits: unsaved hit information found from sensitive volume FDA2, hit discarded. 8000 events simulated 9000 events simulated 10000 events simulated Warning in savehits: unsaved hit information found from sensitive volume FDA4, hit discarded. Warning in savehits: unsaved hit information found from sensitive volume FDA4, hit discarded. Warning in savehits: unsaved hit information found from sensitive volume FDA4, hit discarded. 20000 events simulated *** GTRACK *** More than 100000 steps, tracking abandoned! IEVENT= 20209 IDEVT= 20209 Random Seeds = 1745859247 307570331 Track 13 stack 17 NTMULT 94 NEUTRINO Time of flight 56.306 ns 30000 events simulated *** GTRACK *** More than 100000 steps, tracking abandoned! IEVENT= 30830 IDEVT= 30830 Random Seeds = 1223501851 12497375 Track 12 stack 11 NTMULT 68 NEUTRINO Time of flight 27.552 ns 40000 events simulated Warning in savehits: unsaved hit information found from sensitive volume FDA4, hit discarded. Warning in savehits: unsaved hit information found from sensitive volume FDA4, hit discarded. Warning in savehits: unsaved hit information found from sensitive volume FDA1, hit discarded. 50000 events simulated Warning in savehits: unsaved hit information found from sensitive volume FDA4, hit discarded. Warning in savehits: unsaved hit information found from sensitive volume FDA1, hit discarded. 60000 events simulated Warning in savehits: unsaved hit information found from sensitive volume FDA1, hit discarded. 70000 events simulated Warning in savehits: unsaved hit information found from sensitive volume FDA4, hit discarded. Warning in savehits: unsaved hit information found from sensitive volume FDA2, hit discarded. Warning in savehits: unsaved hit information found from sensitive volume FDA1, hit discarded. 80000 events simulated Warning in savehits: unsaved hit information found from sensitive volume FDA4, hit discarded. Warning in savehits: unsaved hit information found from sensitive volume FDA3, hit discarded. Warning in savehits: unsaved hit information found from sensitive volume FDA4, hit discarded. Warning in savehits: unsaved hit information found from sensitive volume FDA3, hit discarded. 90000 events simulated *** GTRACK *** More than 100000 steps, tracking abandoned! IEVENT= 91152 IDEVT= 91152 Random Seeds = 1910732951 1826921927 Track 11 stack 15 NTMULT 57 NEUTRINO Time of flight 2316.439 ns Warning in savehits: unsaved hit information found from sensitive volume FDA2, hit discarded. 100000 events simulated Warning in savehits: unsaved hit information found from sensitive volume FDA1, hit discarded. Warning in savehits: unsaved hit information found from sensitive volume FDA2, hit discarded. Warning in savehits: unsaved hit information found from sensitive volume FDA2, hit discarded. Warning in savehits: unsaved hit information found from sensitive volume FDA3, hit discarded. Warning in savehits: unsaved hit information found from sensitive volume FDA2, hit discarded. Warning in savehits: unsaved hit information found from sensitive volume FDA2, hit discarded. Warning in savehits: unsaved hit information found from sensitive volume FDA2, hit discarded. Warning in savehits: unsaved hit information found from sensitive volume FDA2, hit discarded. Warning in savehits: unsaved hit information found from sensitive volume FDA3, hit discarded. 1 **** NUMBER OF EVENTS PROCESSED = 150000 **** RANDOM NUMBER GENERATOR AFTER LAST COMPLETE EVENT 1591462364 1904649647 **** TIME TO PROCESS ONE EVENT IS = 0.1519 SECONDS MZEND. Usage statistics for 2 dynamic stores. Map of store 0 /GCBANK/ ------------------------ Division Number of times Kind Max-size Garb-coll. Mode Position used allowed Wiped user auto Pushd Redcd 1 QDIV1 0 1 5203 0 4999968 0 0 0 0 0 2 QDIV2 1 1 4068548 140929 4999968 150000 0 0 0 0 19 system 1 8 4142723 68180 4999968 0 0 0 0 0 20 Constant 1 2 4999968 834024 4000000 0 0 131 145 0 Map of store 1 /PAWC/ ------------------------ Division Number of times Kind Max-size Garb-coll. Mode Position used allowed Wiped user auto Pushd Redcd 1 QDIV1 0 1 2 0 4999585 0 0 0 0 0 2 QDIV2 1 1 4998185 1100 4999585 0 0 0 0 0 19 system 1 8 4998585 111 4999585 0 0 0 0 0 20 HIGZ 0 4 4998585 0 5000000 0 0 0 0 0 RZEND. called for RZFILE ***** Normal exit from Hall D GEANT ***** Running mcsmear ... JANA >> Enabling z compression of output HDDM file stream (default) JANA >> Enabling CRC data integrity check in output HDDM file stream JANA >>Launching threads . JANA >>Installing special signal handler for mcsmear... JANA >>Opening source "hdgeant.hddm" of type: HDDM JANA >>In MyProcessor::brun() JANA >>Created JCalibration object of type: JCalibrationCCDB JANA >>Generated via: JCalibration using CCDB for MySQL and SQLite databases JANA >>Run:1501 JANA >>URL: mysql://ccdb_user@hallddb.jlab.org/ccdb JANA >>context: variation=mc JANA >>comment: Variation for simulations with data conditions JANA >>checking context = variation=mc get BCAL/bcal_smear_parms_v2 parameters from CCDB... Get BCAL/digi_scales parameters from CCDB... Get BCAL/base_time_offset parameters from CCDB... JANA >>Creating DGeometry: JANA >> Run requested:1501 found:1501 JANA >> Run validity range: 1501-1501 JANA >> URL="xmlfile:///u/scratch/gluex/nightly/2017-10-05/Linux_CentOS6-x86_64-gcc4.9.2/hdds/main_HDDS.xml" context="default" JANA >> Type="JGeometryXML" JANA >>Found 22 material maps in calib. DB JANA >>Read in 22 material maps for run 1501 containing 75673 grid points total Get FCAL/fcal_parms parameters from CCDB... get FCAL/gains from calibDB get FCAL/digi_scales parameters from calibDB get FCAL/mc_timing_smear parameters from calibDB JANA >>get CDC/cdc_parms parameters from CCDB... Get FDC/fdc_parms parameters from CCDB... Get TOF/tof_parms parameters from CCDB... get TOF/paddle_resolutions from calibDB Get START_COUNTER/start_parms parameters from CCDB... get START_COUNTER/time_resol_paddle from calibDB get START_COUNTER/paddle_mc_efficiency from calibDB JANA ERROR>>File with name "/home/hdops/CDAQ/daq_dev_v0.31/daq/config/hd_all/fcal_all_m8.conf" doesn't exist for run 1501 JANA >> JANA >> --- Configuration Parameters -- JANA >> JANA:BATCH_MODE = 1  JANA >> THREAD_TIMEOUT = 30 seconds JANA >> ------------------------------- JANA >> JANA >>No more event sources JANA >>Thread 0x7f6ee8a49700 completed gracefully: Thu Oct 5 14:49:14 2017 JANA >>Merging thread 0 (0x7f6ee8a49700) ... Closed HDDM file 150000 event written to hdgeant_smeared.hddm JANA >>Merging event reader thread ... JANA >> 150000 events processed (150000 events read) Average rate: 89.0Hz Running hd_root with danarest ... JANA >>OUTPUT_FILENAME: hd_root.root JANA >>Initializing plugin "/u/scratch/gluex/nightly/2017-10-05/Linux_CentOS6-x86_64-gcc4.9.2/sim-recon/Linux_CentOS6-x86_64-gcc4.9.2/plugins/danarest.so" ... Opened ROOT file "hd_root.root" ... JANA >>Launching threads . JANA >>Opening source "hdgeant_smeared.hddm" of type: HDDM JANA >>Created JCalibration object of type: JCalibrationCCDB JANA >>Generated via: JCalibration using CCDB for MySQL and SQLite databases JANA >>Run:1501 JANA >>URL: mysql://ccdb_user@hallddb.jlab.org/ccdb JANA >>context: variation=mc JANA >>comment: Variation for simulations with data conditions JANA >>Creating DGeometry: JANA >> Run requested:1501 found:1501 JANA >> Run validity range: 1501-1501 JANA >> URL="xmlfile:///u/scratch/gluex/nightly/2017-10-05/Linux_CentOS6-x86_64-gcc4.9.2/hdds/main_HDDS.xml" context="default" JANA >> Type="JGeometryXML" JANA >>Found 22 material maps in calib. DB JANA >>Read in 22 material maps for run 1501 containing 75673 grid points total JANA >>In DBCALHit_factory, loading constants... JANA >>in DBCALPoint_factory, loading constants ... JANA >>DBCALUnifiedHit_factory: Using ADC times only. Error [1270]: in [MySQLDataProvider::GetAssignmentShort(int, const string&, time_t, const string&)] No data was selected. Table '/BCAL/timewalk_tdc_c4' for run='1501', timestampt='0' and variation='default' JANA >>In DBCALTDCHit_factory, loading constants... JANA ERROR>>Error loading BCAL/timewalk_tdc ! JANA >>Reading Magnetic field map from Magnets/Solenoid/solenoid_1200A_poisson_20140520 ... Nx=251 Ny=1 Nz=701 ) at 0x7f0081860b40 Reading fine-mesh B-field data from /group/halld/www/halldweb/html/resources/Magnets/Solenoid/finemeshes/solenoid_1200A_poisson_20140520.evio rmin: 0 rmax: 88.5 dr: 0.1 zmin: 0 zmax: 600 dz: 0.1 Number of points in z = 6000 Number of points in r = 885 JANA >>175951 entries found (Created Magnetic field map of type DMagneticFieldMapFineMesh Created TGeoManager :0x7f00847b1af0 DParticleID: loading values from PID data base JANA >>Read 840 values from FDC/lorentz_deflections in calibDB JANA >> lorentz_deflections columns (alphabetical): bx bz nx nz x z JANA >>vertex constraint: JANA >> Enabling bz2 compression of output HDDM file stream JANA >> Enabling CRC data integrity check in output HDDM file stream JANA >> JANA >> --- Configuration Parameters -- JANA >> JANA:BATCH_MODE = 1  JANA >> JANA:RESOURCE_DEFAULT_PATH =  JANA >> PLUGINS = danarest  JANA >> THREAD_TIMEOUT = 30 seconds JANA >> ------------------------------- JANA >> JANA >>No more event sources JANA >>Thread 0x7f0094b71700 completed gracefully: Fri Oct 6 13:53:37 2017 JANA >>Merging thread 0 (0x7f0094b71700) ... Closed REST file dana_rest.hddm JANA >>Merging event reader thread ... JANA >> 150000 events processed (150000 events read) Average rate: 1.8Hz Closed ROOT file JANA >>Closing shared object handle 0 ... Running hd_root with b1pi_hists & monitoring_hists ... JANA >>OUTPUT_FILENAME: hd_root.root JANA >>Initializing plugin "/u/scratch/gluex/nightly/2017-10-05/Linux_CentOS6-x86_64-gcc4.9.2/sim-recon/Linux_CentOS6-x86_64-gcc4.9.2/plugins/b1pi_hists.so" ... JANA >>Initializing plugin "/u/scratch/gluex/nightly/2017-10-05/Linux_CentOS6-x86_64-gcc4.9.2/sim-recon/Linux_CentOS6-x86_64-gcc4.9.2/plugins/monitoring_hists.so" ... Opened ROOT file "hd_root.root" ... JANA >>Launching threads . JANA >>Opening source "dana_rest.hddm" of type: REST | This is a REST event stream... JANA >>Creating DGeometry: JANA >> Run requested:1501 found:1501 JANA >> Run validity range: 1501-1501 JANA >> URL="xmlfile:///u/scratch/gluex/nightly/2017-10-05/Linux_CentOS6-x86_64-gcc4.9.2/hdds/main_HDDS.xml" context="default" JANA >> Type="JGeometryXML" JANA >>Created JCalibration object of type: JCalibrationCCDB JANA >>Generated via: JCalibration using CCDB for MySQL and SQLite databases JANA >>Run:1501 JANA >>URL: mysql://ccdb_user@hallddb.jlab.org/ccdb JANA >>context: variation=mc JANA >>comment: Variation for simulations with data conditions JANA >>Found 22 material maps in calib. DB JANA >>Read in 22 material maps for run 1501 containing 75673 grid points total THIS DREACTIONSTEP CONSTRUCTOR IS DEPRECATED. IT WILL WORK, BUT PLEASE SWITCH TO ONE OF THE NEW CONSTRUCTOR CALLS. THIS DREACTIONSTEP CONSTRUCTOR IS DEPRECATED. IT WILL WORK, BUT PLEASE SWITCH TO ONE OF THE NEW CONSTRUCTOR CALLS. THIS DREACTIONSTEP CONSTRUCTOR IS DEPRECATED. IT WILL WORK, BUT PLEASE SWITCH TO ONE OF THE NEW CONSTRUCTOR CALLS. WARNING: USING DReaction::Set_MaxPhotonRFDeltaT() IS DEPRECATED. PLEASE SWITCH TO Set_NumPlusMinusRFBunches(). Created TGeoManager :0x7f638d3965b0 DParticleID: loading values from PID data base JANA >>Reading Magnetic field map from Magnets/Solenoid/solenoid_1200A_poisson_20140520 ... Nx=251 Ny=1 Nz=701 ) at 0x7f638dd02c70 Reading fine-mesh B-field data from /group/halld/www/halldweb/html/resources/Magnets/Solenoid/finemeshes/solenoid_1200A_poisson_20140520.evio rmin: 0 rmax: 88.5 dr: 0.1 zmin: 0 zmax: 600 dz: 0.1 Number of points in z = 6000 Number of points in r = 885 JANA >>175951 entries found (Created Magnetic field map of type DMagneticFieldMapFineMesh JANA >>In DTOFHit_factory, loading constants... TOF Timing Cuts for PRUNING: 0 +/- 100 JANA >> JANA >> --- Configuration Parameters -- JANA >> JANA:BATCH_MODE = 1  JANA >> JANA:RESOURCE_DEFAULT_PATH =  JANA >> PLUGINS = b1pi_hists,monitoring_hists JANA >> THREAD_TIMEOUT = 30 seconds  JANA >> ------------------------------- THIS DREACTIONSTEP CONSTRUCTOR IS DEPRECATED. IT WILL WORK, BUT PLEASE SWITCH TO ONE OF THE NEW CONSTRUCTOR CALLS. =========================================================== There was a crash. This is the entire stack trace of all threads: =========================================================== Thread 3 (Thread 0x7f63a1e6b700 (LWP 26802)): #0 0x000000375a40b5bc in pthread_cond_wait GLIBC_2.3.2 () from /lib64/libpthread.so.0 #1 0x0000000000ea6df0 in jana::JApplication::EventBufferThread() () at src/JANA/JApplication.cc:742 #2 0x0000000000ea7029 in LaunchEventBufferThread(void*) () at src/JANA/JApplication.cc:666 #3 0x000000375a4079d1 in start_thread () from /lib64/libpthread.so.0 #4 0x0000003759ce88fd in clone () from /lib64/libc.so.6 Thread 2 (Thread 0x7f63a146a700 (LWP 26803)): #0 0x0000003759cac65d in waitpid () from /lib64/libc.so.6 #1 0x0000003759c3e609 in do_system () from /lib64/libc.so.6 #2 0x0000003759c3e940 in system () from /lib64/libc.so.6 #3 0x00007f63bbc28a8a in TUnixSystem::StackTrace() () at /u/group/halld/Software/builds/Linux_CentOS6-x86_64-gcc4.9.2/root/root-6.08.06/core/unix/src/TUnixSystem.cxx:2118 #4 0x00007f63bbc2af8c in TUnixSystem::DispatchSignals(ESignals) () at /u/group/halld/Software/builds/Linux_CentOS6-x86_64-gcc4.9.2/root/root-6.08.06/core/unix/src/TUnixSystem.cxx:3625 #5 #6 TMatrixTSym::TMatrixTSym(TMatrixTSym const&) () at /group/halld/Software/builds/Linux_CentOS6-x86_64-gcc4.9.2/root/root-6.08.06/include/TMatrixTSym.h:66 #7 0x00000000007a43f0 in DHistogramAction_ParticleComboGenReconComparison::Fill_NeutralHists(DNeutralParticleHypothesis const*, DMCThrown const*, DEventRFBunch const*, unsigned long) () at libraries/ANALYSIS/DHistogramActions_Thrown.cc:572 #8 0x00000000007a5a28 in DHistogramAction_ParticleComboGenReconComparison::Perform_Action(jana::JEventLoop*, DAnalysis::DParticleCombo const*) () at libraries/ANALYSIS/DHistogramActions_Thrown.cc:430 #9 0x00000000006719a8 in DAnalysisResults_factory::Execute_Actions(jana::JEventLoop*, bool, DAnalysis::DParticleCombo const*, DAnalysis::DParticleCombo const*, bool, std::vector > const&, unsigned long&, std::vector >&, int&) () at libraries/ANALYSIS/DAnalysisAction.h:131 #10 0x000000000067568e in DAnalysisResults_factory::evnt(jana::JEventLoop*, unsigned long) () at libraries/ANALYSIS/DAnalysisResults_factory.cc:314 #11 0x0000000000667213 in jana::JFactory::Get(std::vector >&) () at /u/group/halld/Software/builds/Linux_CentOS6-x86_64-gcc4.9.2/jana/jana_0.7.9^ccdb165/Linux_CentOS6-x86_64-gcc4.9.2/include/JANA/JFactory.h:295 #12 0x0000000000667ce5 in jana::JFactory* jana::JEventLoop::GetFromFactory(std::vector >&, char const*, jana::JEventLoop::data_source_t&, bool) () at /u/group/halld/Software/builds/Linux_CentOS6-x86_64-gcc4.9.2/jana/jana_0.7.9^ccdb165/Linux_CentOS6-x86_64-gcc4.9.2/include/JANA/JEventLoop.h:452 #13 0x0000000000667f68 in jana::JFactory* jana::JEventLoop::Get(std::vector >&, char const*, bool) () at /u/group/halld/Software/builds/Linux_CentOS6-x86_64-gcc4.9.2/jana/jana_0.7.9^ccdb165/Linux_CentOS6-x86_64-gcc4.9.2/include/JANA/JEventLoop.h:309 #14 0x00007f63a2143a78 in DEventProcessor_b1pi_hists::evnt(jana::JEventLoop*, unsigned long) () at plugins/Analysis/b1pi_hists/DEventProcessor_b1pi_hists.cc:48 #15 0x0000000000ec2252 in jana::JEventLoop::OneEvent() () at src/JANA/JEventLoop.cc:693 #16 0x0000000000ec32c4 in jana::JEventLoop::Loop() () at src/JANA/JEventLoop.cc:496 #17 0x0000000000e990da in LaunchThread(void*) () at src/JANA/JApplication.cc:1382 #18 0x000000375a4079d1 in start_thread () from /lib64/libpthread.so.0 #19 0x0000003759ce88fd in clone () from /lib64/libc.so.6 Thread 1 (Thread 0x7f63b5f69180 (LWP 26793)): #0 0x000000375a40ef3d in nanosleep () from /lib64/libpthread.so.0 #1 0x0000000000ea2b3e in jana::JApplication::Run(jana::JEventProcessor*, int) () at src/JANA/JApplication.cc:1613 #2 0x0000000000624cef in main () at programs/Analysis/hd_root/hd_root.cc:45 =========================================================== The lines below might hint at the cause of the crash. You may get help by asking at the ROOT forum http://root.cern.ch/forum. Only if you are really convinced it is a bug in ROOT then please submit a report at http://root.cern.ch/bugs. Please post the ENTIRE stack trace from above as an attachment in addition to anything else that might help us fixing this issue. =========================================================== #6 TMatrixTSym::TMatrixTSym(TMatrixTSym const&) () at /group/halld/Software/builds/Linux_CentOS6-x86_64-gcc4.9.2/root/root-6.08.06/include/TMatrixTSym.h:66 #7 0x00000000007a43f0 in DHistogramAction_ParticleComboGenReconComparison::Fill_NeutralHists(DNeutralParticleHypothesis const*, DMCThrown const*, DEventRFBunch const*, unsigned long) () at libraries/ANALYSIS/DHistogramActions_Thrown.cc:572 #8 0x00000000007a5a28 in DHistogramAction_ParticleComboGenReconComparison::Perform_Action(jana::JEventLoop*, DAnalysis::DParticleCombo const*) () at libraries/ANALYSIS/DHistogramActions_Thrown.cc:430 #9 0x00000000006719a8 in DAnalysisResults_factory::Execute_Actions(jana::JEventLoop*, bool, DAnalysis::DParticleCombo const*, DAnalysis::DParticleCombo const*, bool, std::vector > const&, unsigned long&, std::vector >&, int&) () at libraries/ANALYSIS/DAnalysisAction.h:131 #10 0x000000000067568e in DAnalysisResults_factory::evnt(jana::JEventLoop*, unsigned long) () at libraries/ANALYSIS/DAnalysisResults_factory.cc:314 #11 0x0000000000667213 in jana::JFactory::Get(std::vector >&) () at /u/group/halld/Software/builds/Linux_CentOS6-x86_64-gcc4.9.2/jana/jana_0.7.9^ccdb165/Linux_CentOS6-x86_64-gcc4.9.2/include/JANA/JFactory.h:295 #12 0x0000000000667ce5 in jana::JFactory* jana::JEventLoop::GetFromFactory(std::vector >&, char const*, jana::JEventLoop::data_source_t&, bool) () at /u/group/halld/Software/builds/Linux_CentOS6-x86_64-gcc4.9.2/jana/jana_0.7.9^ccdb165/Linux_CentOS6-x86_64-gcc4.9.2/include/JANA/JEventLoop.h:452 #13 0x0000000000667f68 in jana::JFactory* jana::JEventLoop::Get(std::vector >&, char const*, bool) () at /u/group/halld/Software/builds/Linux_CentOS6-x86_64-gcc4.9.2/jana/jana_0.7.9^ccdb165/Linux_CentOS6-x86_64-gcc4.9.2/include/JANA/JEventLoop.h:309 #14 0x00007f63a2143a78 in DEventProcessor_b1pi_hists::evnt(jana::JEventLoop*, unsigned long) () at plugins/Analysis/b1pi_hists/DEventProcessor_b1pi_hists.cc:48 #15 0x0000000000ec2252 in jana::JEventLoop::OneEvent() () at src/JANA/JEventLoop.cc:693 #16 0x0000000000ec32c4 in jana::JEventLoop::Loop() () at src/JANA/JEventLoop.cc:496 #17 0x0000000000e990da in LaunchThread(void*) () at src/JANA/JApplication.cc:1382 #18 0x000000375a4079d1 in start_thread () from /lib64/libpthread.so.0 #19 0x0000003759ce88fd in clone () from /lib64/libc.so.6 =========================================================== Create plots ------------------------------------------------------------ | Welcome to ROOT 6.08/06 http://root.cern.ch | | (c) 1995-2016, The ROOT Team | | Built for linuxx8664gcc | | From tag v6-08-06, 2 March 2017 | | Try '.help', '.demo', '.license', '.credits', '.quit'/'.q' | ------------------------------------------------------------ Processing mk_pics.C... #0 0x0000003759cac61e in waitpid () from /lib64/libc.so.6 #1 0x0000003759c3e609 in do_system () from /lib64/libc.so.6 #2 0x00007faa654f0a8a in TUnixSystem::StackTrace() () at /u/group/halld/Software/builds/Linux_CentOS6-x86_64-gcc4.9.2/root/root-6.08.06/core/unix/src/TUnixSystem.cxx:2118 #3 0x00007faa620e78e5 in cling::MultiplexInterpreterCallbacks::PrintStackTrace() () from /u/group/halld/Software/builds/Linux_CentOS6-x86_64-gcc4.9.2/root/root-6.08.06/lib/libCling.so #4 0x00007faa620e7258 in cling_runtime_internal_throwIfInvalidPointer () from /u/group/halld/Software/builds/Linux_CentOS6-x86_64-gcc4.9.2/root/root-6.08.06/lib/libCling.so #5 0x00007faa50ff35a6 in ?? () #6 0x00000000026f5750 in ?? () #7 0x0000000000000000 in ?? () terminate called after throwing an instance of 'cling::InvalidDerefException' what(): Trying to dereference null pointer or trying to call routine taking non-null arguments #count events #count b1_pi.hddm 150000 #count hdgeant.hddm 150000 #count hdgeant_smeared.hddm 150000 #count dana_rest.hddm 150001 hddm-xml: Error opening input stream dana_rest_b1pi.hddm #count dana_rest_b1pi.hddm 0 mkdir: created directory `/group/halld/www/halldweb/html/b1pi/2017-10-05/Linux_CentOS6-x86_64-gcc4.9.2' cp: cannot stat `*.pdf': No such file or directory cp: cannot stat `*.gif': No such file or directory `index.html' -> `/group/halld/www/halldweb/html/b1pi/2017-10-05/Linux_CentOS6-x86_64-gcc4.9.2/index.html'