Pseudo-terminal will not be allocated because stdin is not a terminal. mkdir: created directory '/u/scratch/gluex/b1pi/2016-10-20/Linux_RHEL7-x86_64-gcc4.8.5' info: number of threads not defined, using default value 1 info: vertex parameters not defined, using default values 0 0 50 80 NEVENTS = 150000 VERTEX = 0 0 50 80 NTHREADS = 1 B1PI_TEST_DIR = /group/halld/Software/scripts/b1pi_test Copying script files and macros ... '/group/halld/Software/scripts/b1pi_test/b1pi_cron_one.sh' -> './b1pi_cron_one.sh' '/group/halld/Software/scripts/b1pi_test/b1pi_cron_one.sh~' -> './b1pi_cron_one.sh~' '/group/halld/Software/scripts/b1pi_test/b1pi_cron.sh' -> './b1pi_cron.sh' '/group/halld/Software/scripts/b1pi_test/b1pi_cron.sh~' -> './b1pi_cron.sh~' '/group/halld/Software/scripts/b1pi_test/b1_pi.input' -> './b1_pi.input' '/group/halld/Software/scripts/b1pi_test/b1pi_message.sh' -> './b1pi_message.sh' '/group/halld/Software/scripts/b1pi_test/b1pi_test.sh' -> './b1pi_test.sh' '/group/halld/Software/scripts/b1pi_test/hddm_counter.pl' -> './hddm_counter.pl' '/group/halld/Software/scripts/b1pi_test/index.html' -> './index.html' cp: omitting directory '/group/halld/Software/scripts/b1pi_test/macros' '/group/halld/Software/scripts/b1pi_test/my_b1pi_test.sh' -> './my_b1pi_test.sh' '/group/halld/Software/scripts/b1pi_test/README' -> './README' '/group/halld/Software/scripts/b1pi_test/macros/anal1.C' -> './anal1.C' '/group/halld/Software/scripts/b1pi_test/macros/b1_pi.C' -> './b1_pi.C' '/group/halld/Software/scripts/b1pi_test/macros/b1pi_gen.C' -> './b1pi_gen.C' '/group/halld/Software/scripts/b1pi_test/macros/b1pi_gen.h' -> './b1pi_gen.h' '/group/halld/Software/scripts/b1pi_test/macros/b1_pi.h' -> './b1_pi.h' '/group/halld/Software/scripts/b1pi_test/macros/b1pi_rec.C' -> './b1pi_rec.C' '/group/halld/Software/scripts/b1pi_test/macros/b1pi_rec.h' -> './b1pi_rec.h' '/group/halld/Software/scripts/b1pi_test/macros/fit_voigt.C' -> './fit_voigt.C' '/group/halld/Software/scripts/b1pi_test/macros/makeallplots.C' -> './makeallplots.C' '/group/halld/Software/scripts/b1pi_test/macros/mass_X.C' -> './mass_X.C' '/group/halld/Software/scripts/b1pi_test/macros/mk_pics.C' -> './mk_pics.C' '/group/halld/Software/scripts/b1pi_test/macros/momentum.C' -> './momentum.C' '/group/halld/Software/scripts/b1pi_test/macros/StandardLabels.C' -> './StandardLabels.C' '/group/halld/Software/scripts/b1pi_test/macros/theta.C' -> './theta.C' Running genr8 ... Using runNo: 1501 Maximum number of events: 150000 Opening file b1_pi.ascii for output. Reading: beamp.x beamp.y beamp.z beamMass Found: 0.000000 0.000000 9.000000 0.000000 Reading: targetp.x targetp.y targetp.z targetMass Found: 0.000000 0.000000 0.000000 0.938000 Reading: t-channelSlope Found: 5.000000 Reading: number of particles need to describe the decay Found: 12 Reading: part# chld1# chld2# prnt# Id nchld mass width chrg flag Found: 0 -1 -1 -1 14 0 0.938000 0.000000 1 11 Found: 1 2 3 -1 0 2 2.000000 0.100000 1 0 Found: 2 4 5 1 0 2 1.235000 0.142000 1 0 Found: 3 4 5 1 9 0 0.140000 0.000000 -1 11 Found: 4 6 7 2 0 2 0.783000 0.009000 0 0 Found: 5 6 7 2 8 0 0.140000 0.000000 1 11 Found: 6 8 9 4 0 2 0.776000 0.150000 0 0 Found: 7 10 11 4 7 2 0.135000 0.000000 0 0 Found: 8 10 11 6 8 0 0.140000 0.000000 1 11 Found: 9 10 11 6 9 0 0.140000 0.000000 -1 11 Found: 10 10 11 7 1 0 0.000000 0.000000 0 11 Found: 11 10 11 7 1 0 0.000000 0.000000 0 11 Found EOI---- Input File appears Fine. Calculating Lorentz Factor: 9000 Calculating Lorentz Factor: 8000 Calculating Lorentz Factor: 7000 Calculating Lorentz Factor: 6000 Calculating Lorentz Factor: 5000 Calculating Lorentz Factor: 4000 Calculating Lorentz Factor: 3000 Calculating Lorentz Factor: 2000 Calculating Lorentz Factor: 1000 Calculating Lorentz Factor: 100 Calculating Lorentz Factor: 90 Calculating Lorentz Factor: 80 Calculating Lorentz Factor: 70 Calculating Lorentz Factor: 60 Calculating Lorentz Factor: 50 Calculating Lorentz Factor: 40 Calculating Lorentz Factor: 30 Calculating Lorentz Factor: 20 Calculating Lorentz Factor: 10 Calculating Lorentz Factor: 0 Events generated: 100 Events accepted: 46 Events generated: 200 Events accepted: 85 Events generated: 300 Events accepted: 126 Events generated: 400 Events accepted: 170 Events generated: 500 Events accepted: 212 Events generated: 600 Events accepted: 261 Events generated: 700 Events accepted: 310 Events generated: 800 Events accepted: 365 Events generated: 900 Events accepted: 412 Events generated: 1000 Events accepted: 459 Events generated: 10000 Events accepted: 4833 Events generated: 20000 Events accepted: 9668 Events generated: 30000 Events accepted: 14428 Events generated: 40000 Events accepted: 19217 Events generated: 50000 Events accepted: 24010 Events generated: 60000 Events accepted: 28753 Events generated: 70000 Events accepted: 33483 Events generated: 80000 Events accepted: 38317 Events generated: 90000 Events accepted: 43068 Events generated: 100000 Events accepted: 47847 Events generated: 110000 Events accepted: 52633 Events generated: 120000 Events accepted: 57421 Events generated: 130000 Events accepted: 62157 Events generated: 140000 Events accepted: 66867 Events generated: 150000 Events accepted: 71533 Events generated: 160000 Events accepted: 76296 Events generated: 170000 Events accepted: 81061 Events generated: 180000 Events accepted: 85874 Events generated: 190000 Events accepted: 90630 Events generated: 200000 Events accepted: 95375 Events generated: 210000 Events accepted: 100122 Events generated: 220000 Events accepted: 104856 Events generated: 230000 Events accepted: 109691 Events generated: 240000 Events accepted: 114409 Events generated: 250000 Events accepted: 119079 Events generated: 260000 Events accepted: 123843 Events generated: 270000 Events accepted: 128661 Events generated: 280000 Events accepted: 133419 Events generated: 290000 Events accepted: 138220 Events generated: 300000 Events accepted: 143016 Events generated: 310000 Events accepted: 147782 Max Lorentz Factor:0.001257 Events generated:314731 Events accepted:150000 Setting random number seed to: 1476984970 Converting generated events to HDDM ... Wrote event 1000 Wrote event 2000 Wrote event 3000 Wrote event 4000 Wrote event 5000 Wrote event 6000 Wrote event 7000 Wrote event 8000 Wrote event 9000 Wrote event 10000 Wrote event 11000 Wrote event 12000 Wrote event 13000 Wrote event 14000 Wrote event 15000 Wrote event 16000 Wrote event 17000 Wrote event 18000 Wrote event 19000 Wrote event 20000 Wrote event 21000 Wrote event 22000 Wrote event 23000 Wrote event 24000 Wrote event 25000 Wrote event 26000 Wrote event 27000 Wrote event 28000 Wrote event 29000 Wrote event 30000 Wrote event 31000 Wrote event 32000 Wrote event 33000 Wrote event 34000 Wrote event 35000 Wrote event 36000 Wrote event 37000 Wrote event 38000 Wrote event 39000 Wrote event 40000 Wrote event 41000 Wrote event 42000 Wrote event 43000 Wrote event 44000 Wrote event 45000 Wrote event 46000 Wrote event 47000 Wrote event 48000 Wrote event 49000 Wrote event 50000 Wrote event 51000 Wrote event 52000 Wrote event 53000 Wrote event 54000 Wrote event 55000 Wrote event 56000 Wrote event 57000 Wrote event 58000 Wrote event 59000 Wrote event 60000 Wrote event 61000 Wrote event 62000 Wrote event 63000 Wrote event 64000 Wrote event 65000 Wrote event 66000 Wrote event 67000 Wrote event 68000 Wrote event 69000 Wrote event 70000 Wrote event 71000 Wrote event 72000 Wrote event 73000 Wrote event 74000 Wrote event 75000 Wrote event 76000 Wrote event 77000 Wrote event 78000 Wrote event 79000 Wrote event 80000 Wrote event 81000 Wrote event 82000 Wrote event 83000 Wrote event 84000 Wrote event 85000 Wrote event 86000 Wrote event 87000 Wrote event 88000 Wrote event 89000 Wrote event 90000 Wrote event 91000 Wrote event 92000 Wrote event 93000 Wrote event 94000 Wrote event 95000 Wrote event 96000 Wrote event 97000 Wrote event 98000 Wrote event 99000 Wrote event 100000 Wrote event 101000 Wrote event 102000 Wrote event 103000 Wrote event 104000 Wrote event 105000 Wrote event 106000 Wrote event 107000 Wrote event 108000 Wrote event 109000 Wrote event 110000 Wrote event 111000 Wrote event 112000 Wrote event 113000 Wrote event 114000 Wrote event 115000 Wrote event 116000 Wrote event 117000 Wrote event 118000 Wrote event 119000 Wrote event 120000 Wrote event 121000 Wrote event 122000 Wrote event 123000 Wrote event 124000 Wrote event 125000 Wrote event 126000 Wrote event 127000 Wrote event 128000 Wrote event 129000 Wrote event 130000 Wrote event 131000 Wrote event 132000 Wrote event 133000 Wrote event 134000 Wrote event 135000 Wrote event 136000 Wrote event 137000 Wrote event 138000 Wrote event 139000 Wrote event 140000 Wrote event 141000 Wrote event 142000 Wrote event 143000 Wrote event 144000 Wrote event 145000 Wrote event 146000 Wrote event 147000 Wrote event 148000 Wrote event 149000 Wrote event 150000 Wrote 150000 events to b1_pi.hddm Creating control.in file ... Running hdgeant ... MZSTOR. ZEBRA table base TAB(0) in /MZCC/ at adr 18011047 112D3A7 HEX MZSTOR. Initialize Store 0 in /GCBANK/ with Store/Table at absolute adrs 12447021 18011047 HEX BDED2D 112D3A7 HEX FFAB17AA 0 relative adrs -5564502 0 with 1 Str. in 2 Links in 5300 Low words in 4999970 words. This store has a fence of 16 words. MZLOGL. Set Log Level 0 for store 0 MZSTOR. Initialize Store 1 in /PAWC/ with Store/Table at absolute adrs 7447009 12446600 HEX 71A1E1 BDEB88 HEX FF5ECC5E FFAB17E1 relative adrs -10564514 -5564447 with 1 Str. in 1 Links in 5001 Low words in 4999990 words. This store has a fence of 5 words. MZLINK. Initialize Link Area /HCBOOK/ for Store 1 NL/NS= 49 4 MZDIV. Initialize Division HIGZ in Store 1 NW/NWMAX= 10005000000, MODE/KIND= 0 3 Division 20 initialized. MZLINK. Initialize Link Area /HILINK/ for Store 1 NL/NS= 42 2 Version 1.29/04 of HIGZ started 1***** GEANT Version 3.21/14 Released on 19032002 0***** Correction Cradle Version 0.1400 MODE VERSION 1.00 : MZDIV. Initialize Division Constant in Store 0 NW/NWMAX= 20004000000, MODE/KIND= 1 2 Division 20 initialized. MZLINK. Initialize Link Area /GCLINK/ for Store 0 NL/NS= 20 20 MZLINK. Initialize Link Area /GCSLNK/ for Store 0 NL/NS= 100 100 run number 1501 0 JANA >>Created JCalibration object of type: JCalibrationCCDB JANA >>Generated via: JCalibration using CCDB for MySQL and SQLite databases JANA >>Run:1501 JANA >>URL: mysql://ccdb_user@hallddb.jlab.org/ccdb JANA >>context: variation=mc JANA >>Reading Magnetic field map from Magnets/Solenoid/solenoid_1200A_poisson_20140520 ... Nx=251 Ny=1 Nz=701 ) at 0x5d81f80 Reading fine-mesh B-field data from /group/halld/www/halldweb/html/resources/Magnets/Solenoid/finemeshes/solenoid_1200A_poisson_20140520.evio rmin: 0 rmax: 88.5 dr: 0.1 zmin: 0 zmax: 600 dz: 0.1 Number of points in z = 6000 Number of points in r = 885 JANA >>175951 entries found (Creating DGeometry: JANA >> Run requested:1501 found:1501 JANA >> Run validity range: 1501-1501 JANA >> URL="xmlfile:///u/scratch/gluex/nightly/2016-10-20/Linux_RHEL7-x86_64-gcc4.8.5/hdds/main_HDDS.xml" context="default" JANA >> Type="JGeometryXML" JANA >>Found 18 material maps in calib. DB for run 1501 JANA >>Read in 18 material maps containing 62173 grid points total JANA >> JANA >>Reading Pair Spectrometer Magnetic field map from Magnets/PairSpectrometer/PS_1.8T_20150513_test ... Nx=40 Ny=1 Nz=121 ) at 0x9f4c6b0 RZOPEN. record length: 65536 > maximum safe value (8191 words). RZOPEN. Automatic record length determination will not work with this file. RZOPEN. You may have problems transferring your file to other systems or writing it to tape. RZMAKE. Unit 1011 Initializing with LREC= 65536, OPT= X?C MZLINK. Initialize Link Area RZCL for Store 0 NL/NS= 11 0 MZLINK. Initialize Link Area /GCHVIR/ for Store 0 NL/NS= 4 1 MZLINK. Initialize Link Area /GCDINA/ for Store 0 NL/NS= 4 4 1************************************************************ * * * G E A N T Version 3.2114 DATE/TIME 161020/0800 * * * * R U N 1501 * * * ************************************************************ * * * Data structure Date Time GVERSN ZVERSN * * -------------- ---- ---- ------ ------ * * * * INIT 161020 0800 3.2114 3.79 * * * * KINE 161020 0800 3.2114 3.79 * * * * HITS 161020 0800 3.2114 3.79 * * * * DIGI 161020 0800 3.2114 3.79 * * * * Random number seeds: 1315342834 425995190 * * -------------------- * * * *----------------------------------------------------------* * * * Standard TPAR for this run are * * ------------------------------ * * * * CUTGAM= 1.00 MeV CUTELE= 1.00 MeV CUTNEU= 10.00 MeV * * CUTHAD= 10.00 MeV CUTMUO= 10.00 MeV * * BCUTE = 1.00 MeV BCUTM = 1.00 MeV * * DCUTE = 1.00 MeV DCUTM = 1.00 MeV PPCUTM= 10.00 MeV * * IPAIR = 1. ICOMP = 1. IPHOT = 1. * * IPFIS = 0. IDRAY = 1. IANNI = 1. * * IBREM = 1. IHADR = 1. IMUNU = 1. * * IDCAY = 1. ILOSS = 1. IMULS = 1. * * IRAYL = 0. ILABS = 0. ISYNC = 0. * * ISTRA = 0. * * * * * ************************************************************ RZMAKE. Unit 3 Initializing with LREC= 1024, OPT= ON X RZMAKE. new RZ format selected. This file will not be readable with versions of RZ prior to release 94B *** GROUT *** Data structure DRAW version 1 saved to disk *** GROUT *** Data structure MATE version 1 saved to disk *** GROUT *** Data structure PART version 1 saved to disk *** GROUT *** Data structure ROTM version 1 saved to disk *** GROUT *** Data structure RUNG version 1 saved to disk *** GROUT *** Data structure SETS was not found *** GROUT *** Data structure TMED version 1 saved to disk *** GROUT *** Data structure VOLU version 1 saved to disk *** GROUT *** Data structure SCAN was not found RZEND. called for LUN3 0 events simulated settofg: beam_bucket_period_ns set to 2.00400805 TAGGER: ALL parameters loaded from Data Base START: ALL parameters loaded from Data Base CDC: ALL parameters loaded from Data Base FDC: ALL parameters loaded from Data Base BCAL/bcal_parms: ALL parameters loaded from Data Base BCAL/mc_parms: ALL parameters loaded from Data Base FCAL: ALL parameters loaded from Data Base TOF: ALL parameters loaded from Data Base 10 events simulated 20 events simulated 30 events simulated 40 events simulated WARNING: The BCAL records information about certain particles entering it so that information can be used later in mcsmear to properly smear the signals. For this event, more than the maximum number of incident particles has occurred (100) so the list is being truncated to the first 100. All of the signal in the BCAL is still being recorded, but the smearing may be off by a few percent for this event. It is probably nothing to worry about. This long message will only appear once and the following line just once per event whenever this occurs. programs/Simulation/HDGeant/hitBCal.cc:371 too many particles entering BCAL! Some information will be lost. 50 events simulated 60 events simulated 70 events simulated 80 events simulated 90 events simulated 100 events simulated 200 events simulated 300 events simulated 400 events simulated Warning in savehits: unsaved hit information found from sensitive volume FDA2, hit discarded. 500 events simulated HDDM Error: error writing to output hddm file. 60302 bytes of 70400 actually written. Running mcsmear ... shell-init: error retrieving current directory: getcwd: cannot access parent directories: No such file or directory Error in : getcwd() failed shell-init: error retrieving current directory: getcwd: cannot access parent directories: No such file or directory Error in : getcwd() failed shell-init: error retrieving current directory: getcwd: cannot access parent directories: No such file or directory shell-init: error retrieving current directory: getcwd: cannot access parent directories: No such file or directory *** Break *** segmentation violation Error in : getcwd() failed shell-init: error retrieving current directory: getcwd: cannot access parent directories: No such file or directory Error in : getcwd() failed shell-init: error retrieving current directory: getcwd: cannot access parent directories: No such file or directory shell-init: error retrieving current directory: getcwd: cannot access parent directories: No such file or directory =========================================================== There was a crash. This is the entire stack trace of all threads: =========================================================== #0 0x00007f14bf5efb0c in waitpid () from /lib64/libc.so.6 #1 0x00007f14bf574092 in do_system () from /lib64/libc.so.6 #2 0x00007f14c5746019 in TUnixSystem::StackTrace (this=0x25e08e0) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/core/unix/src/TUnixSystem.cxx:2324 #3 0x00007f14c5747d1c in TUnixSystem::DispatchSignals (this=0x25e08e0, sig=kSigSegmentationViolation) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/core/unix/src/TUnixSystem.cxx:3562 #4 #5 0x00007f14bf6953c1 in __strlen_sse2_pminub () from /lib64/libc.so.6 #6 0x00007f14b714b6e1 in (anonymous namespace)::createCIImpl(std::unique_ptr >, int, char const* const*, char const*, bool) () from /group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.5/root/root-6.06.08/lib/libCling.so #7 0x00007f14b714c91b in cling::CIFactory::createCI(llvm::StringRef, int, char const* const*, char const*) () from /group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.5/root/root-6.06.08/lib/libCling.so #8 0x00007f14b7122dc5 in cling::IncrementalParser::IncrementalParser(cling::Interpreter*, int, char const* const*, char const*) () from /group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.5/root/root-6.06.08/lib/libCling.so #9 0x00007f14b70cbdf8 in cling::Interpreter::Interpreter(int, char const* const*, char const*, bool) () from /group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.5/root/root-6.06.08/lib/libCling.so #10 0x00007f14b705e165 in TCling::TCling (this=0x268c7b0, name=, title=) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/core/meta/src/TCling.cxx:1098 #11 0x00007f14b705f3de in CreateInterpreter (interpLibHandle=) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/core/meta/src/TCling.cxx:578 #12 0x00007f14c55d53a8 in TROOT::InitInterpreter (this=0x7f14c5a22860 ) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/core/base/src/TROOT.cxx:1767 #13 0x00007f14c55d5726 in ROOT::Internal::GetROOT2 () at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/core/base/src/TROOT.cxx:362 #14 0x00007f14c5712a16 in ROOT::TGenericClassInfo::GetClass (this=0x7f14c603b080 ) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/core/meta/src/TGenericClassInfo.cxx:198 #15 0x00007f14c5c2ba3a in TGClient::Class () at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/build_dir/gui/gui/G__Gui.cxx:7078 #16 0x00007f14c56843d2 in TQObject::Emit (this=this entry=0x267e2e0, signal_name=signal_name entry=0x7f14c5d5d580 "RegisteredWindow(Window_t)", param=0) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/core/base/src/TQObject.cxx:607 #17 0x00007f14c5c61613 in Emit (param=, signal=0x7f14c5d5d580 "RegisteredWindow(Window_t)", this=0x267e2e0) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/build_dir/include/TQObject.h:127 #18 TGClient::RegisteredWindow (this=this entry=0x267e2d0, w=) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/gui/gui/src/TGClient.cxx:964 #19 0x00007f14c5c6164e in TGClient::RegisterWindow (this=this entry=0x267e2d0, w=w entry=0x267eb80) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/gui/gui/src/TGClient.cxx:514 #20 0x00007f14c5d2f93e in TGWindow::TGWindow (this=0x267eb80, c=0x267e2d0, id=0, parent=0x0) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/gui/gui/src/TGWindow.cxx:92 #21 0x00007f14c5c9600c in TGFrame::TGFrame (this=0x267eb80, c=, id=0, parent=) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/gui/gui/src/TGFrame.cxx:202 #22 0x00007f14c5c61855 in TGClient::TGClient (this=0x267e2d0, dpyName=) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/gui/gui/src/TGClient.cxx:171 #23 0x00007f14c5bf3339 in TGClientInit (this=) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/build_dir/include/TObject.h:158 #24 __static_initialization_and_destruction_0 (__initialize_p=1, __priority=65535) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/gui/gui/src/TGClient.cxx:84 #25 _GLOBAL__sub_I_TGClient.cxx(void) () at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/gui/gui/src/TGClient.cxx:965 #26 0x00007f14c604d3a3 in _dl_init_internal () from /lib64/ld-linux-x86-64.so.2 #27 0x00007f14c603f46a in _dl_start_user () from /lib64/ld-linux-x86-64.so.2 #28 0x0000000000000003 in ?? () #29 0x00007ffeb107e660 in ?? () #30 0x00007ffeb107e668 in ?? () #31 0x00007ffeb107e67c in ?? () #32 0x0000000000000000 in ?? () =========================================================== Running hd_root with danarest ... /group/halld/Software/scripts/b1pi_test/b1pi_test.sh: line 108: 20204 Segmentation fault mcsmear -PJANA:BATCH_MODE=1 hdgeant.hddm Error in : getcwd() failed Error in : getcwd() failed Error in : getcwd() failed shell-init: error retrieving current directory: getcwd: cannot access parent directories: No such file or directory Error in : getcwd() failed shell-init: error retrieving current directory: getcwd: cannot access parent directories: No such file or directory Error in : getcwd() failed shell-init: error retrieving current directory: getcwd: cannot access parent directories: No such file or directory shell-init: error retrieving current directory: getcwd: cannot access parent directories: No such file or directory *** Break *** segmentation violation Error in : getcwd() failed shell-init: error retrieving current directory: getcwd: cannot access parent directories: No such file or directory Error in : getcwd() failed shell-init: error retrieving current directory: getcwd: cannot access parent directories: No such file or directory shell-init: error retrieving current directory: getcwd: cannot access parent directories: No such file or directory =========================================================== There was a crash. This is the entire stack trace of all threads: =========================================================== #0 0x00007efdbcb10b0c in waitpid () from /lib64/libc.so.6 #1 0x00007efdbca95092 in do_system () from /lib64/libc.so.6 #2 0x00007efdc2c67019 in TUnixSystem::StackTrace (this=0x29af8e0) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/core/unix/src/TUnixSystem.cxx:2324 #3 0x00007efdc2c68d1c in TUnixSystem::DispatchSignals (this=0x29af8e0, sig=kSigSegmentationViolation) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/core/unix/src/TUnixSystem.cxx:3562 #4 #5 0x00007efdbcbb63c1 in __strlen_sse2_pminub () from /lib64/libc.so.6 #6 0x00007efdb466c6e1 in (anonymous namespace)::createCIImpl(std::unique_ptr >, int, char const* const*, char const*, bool) () from /group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.5/root/root-6.06.08/lib/libCling.so #7 0x00007efdb466d91b in cling::CIFactory::createCI(llvm::StringRef, int, char const* const*, char const*) () from /group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.5/root/root-6.06.08/lib/libCling.so #8 0x00007efdb4643dc5 in cling::IncrementalParser::IncrementalParser(cling::Interpreter*, int, char const* const*, char const*) () from /group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.5/root/root-6.06.08/lib/libCling.so #9 0x00007efdb45ecdf8 in cling::Interpreter::Interpreter(int, char const* const*, char const*, bool) () from /group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.5/root/root-6.06.08/lib/libCling.so #10 0x00007efdb457f165 in TCling::TCling (this=0x2a5b6b0, name=, title=) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/core/meta/src/TCling.cxx:1098 #11 0x00007efdb45803de in CreateInterpreter (interpLibHandle=) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/core/meta/src/TCling.cxx:578 #12 0x00007efdc2af63a8 in TROOT::InitInterpreter (this=0x7efdc2f43860 ) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/core/base/src/TROOT.cxx:1767 #13 0x00007efdc2af6726 in ROOT::Internal::GetROOT2 () at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/core/base/src/TROOT.cxx:362 #14 0x00007efdc2c33a16 in ROOT::TGenericClassInfo::GetClass (this=0x7efdc355c080 ) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/core/meta/src/TGenericClassInfo.cxx:198 #15 0x00007efdc314ca3a in TGClient::Class () at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/build_dir/gui/gui/G__Gui.cxx:7078 #16 0x00007efdc2ba53d2 in TQObject::Emit (this=this entry=0x2a4d9d0, signal_name=signal_name entry=0x7efdc327e580 "RegisteredWindow(Window_t)", param=0) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/core/base/src/TQObject.cxx:607 #17 0x00007efdc3182613 in Emit (param=, signal=0x7efdc327e580 "RegisteredWindow(Window_t)", this=0x2a4d9d0) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/build_dir/include/TQObject.h:127 #18 TGClient::RegisteredWindow (this=this entry=0x2a4d9c0, w=) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/gui/gui/src/TGClient.cxx:964 #19 0x00007efdc318264e in TGClient::RegisterWindow (this=this entry=0x2a4d9c0, w=w entry=0x2a4e270) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/gui/gui/src/TGClient.cxx:514 #20 0x00007efdc325093e in TGWindow::TGWindow (this=0x2a4e270, c=0x2a4d9c0, id=0, parent=0x0) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/gui/gui/src/TGWindow.cxx:92 #21 0x00007efdc31b700c in TGFrame::TGFrame (this=0x2a4e270, c=, id=0, parent=) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/gui/gui/src/TGFrame.cxx:202 #22 0x00007efdc3182855 in TGClient::TGClient (this=0x2a4d9c0, dpyName=) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/gui/gui/src/TGClient.cxx:171 #23 0x00007efdc3114339 in TGClientInit (this=) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/build_dir/include/TObject.h:158 #24 __static_initialization_and_destruction_0 (__initialize_p=1, __priority=65535) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/gui/gui/src/TGClient.cxx:84 #25 _GLOBAL__sub_I_TGClient.cxx(void) () at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/gui/gui/src/TGClient.cxx:965 #26 0x00007efdc356e3a3 in _dl_init_internal () from /lib64/ld-linux-x86-64.so.2 #27 0x00007efdc356046a in _dl_start_user () from /lib64/ld-linux-x86-64.so.2 #28 0x0000000000000005 in ?? () #29 0x00007fff8a26d638 in ?? () #30 0x00007fff8a26d640 in ?? () #31 0x00007fff8a26d654 in ?? () #32 0x00007fff8a26d661 in ?? () #33 0x00007fff8a26d674 in ?? () #34 0x0000000000000000 in ?? () =========================================================== /group/halld/Software/scripts/b1pi_test/b1pi_test.sh: line 111: 20353 Segmentation fault hd_root -PJANA:BATCH_MODE=1 --nthreads=$NTHREADS -PPLUGINS=danarest hdgeant_smeared.hddm Running hd_root with b1pi_hists & monitoring_hists ... Error in : getcwd() failed Error in : getcwd() failed Error in : getcwd() failed shell-init: error retrieving current directory: getcwd: cannot access parent directories: No such file or directory Error in : getcwd() failed shell-init: error retrieving current directory: getcwd: cannot access parent directories: No such file or directory Error in : getcwd() failed shell-init: error retrieving current directory: getcwd: cannot access parent directories: No such file or directory shell-init: error retrieving current directory: getcwd: cannot access parent directories: No such file or directory *** Break *** segmentation violation Error in : getcwd() failed shell-init: error retrieving current directory: getcwd: cannot access parent directories: No such file or directory Error in : getcwd() failed shell-init: error retrieving current directory: getcwd: cannot access parent directories: No such file or directory shell-init: error retrieving current directory: getcwd: cannot access parent directories: No such file or directory =========================================================== There was a crash. This is the entire stack trace of all threads: =========================================================== #0 0x00007fd6741d2b0c in waitpid () from /lib64/libc.so.6 #1 0x00007fd674157092 in do_system () from /lib64/libc.so.6 #2 0x00007fd67a329019 in TUnixSystem::StackTrace (this=0x279c8e0) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/core/unix/src/TUnixSystem.cxx:2324 #3 0x00007fd67a32ad1c in TUnixSystem::DispatchSignals (this=0x279c8e0, sig=kSigSegmentationViolation) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/core/unix/src/TUnixSystem.cxx:3562 #4 #5 0x00007fd6742783c1 in __strlen_sse2_pminub () from /lib64/libc.so.6 #6 0x00007fd66bd2e6e1 in (anonymous namespace)::createCIImpl(std::unique_ptr >, int, char const* const*, char const*, bool) () from /group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.5/root/root-6.06.08/lib/libCling.so #7 0x00007fd66bd2f91b in cling::CIFactory::createCI(llvm::StringRef, int, char const* const*, char const*) () from /group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.5/root/root-6.06.08/lib/libCling.so #8 0x00007fd66bd05dc5 in cling::IncrementalParser::IncrementalParser(cling::Interpreter*, int, char const* const*, char const*) () from /group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.5/root/root-6.06.08/lib/libCling.so #9 0x00007fd66bcaedf8 in cling::Interpreter::Interpreter(int, char const* const*, char const*, bool) () from /group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.5/root/root-6.06.08/lib/libCling.so #10 0x00007fd66bc41165 in TCling::TCling (this=0x28486b0, name=, title=) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/core/meta/src/TCling.cxx:1098 #11 0x00007fd66bc423de in CreateInterpreter (interpLibHandle=) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/core/meta/src/TCling.cxx:578 #12 0x00007fd67a1b83a8 in TROOT::InitInterpreter (this=0x7fd67a605860 ) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/core/base/src/TROOT.cxx:1767 #13 0x00007fd67a1b8726 in ROOT::Internal::GetROOT2 () at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/core/base/src/TROOT.cxx:362 #14 0x00007fd67a2f5a16 in ROOT::TGenericClassInfo::GetClass (this=0x7fd67ac1e080 ) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/core/meta/src/TGenericClassInfo.cxx:198 #15 0x00007fd67a80ea3a in TGClient::Class () at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/build_dir/gui/gui/G__Gui.cxx:7078 #16 0x00007fd67a2673d2 in TQObject::Emit (this=this entry=0x283a9d0, signal_name=signal_name entry=0x7fd67a940580 "RegisteredWindow(Window_t)", param=0) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/core/base/src/TQObject.cxx:607 #17 0x00007fd67a844613 in Emit (param=, signal=0x7fd67a940580 "RegisteredWindow(Window_t)", this=0x283a9d0) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/build_dir/include/TQObject.h:127 #18 TGClient::RegisteredWindow (this=this entry=0x283a9c0, w=) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/gui/gui/src/TGClient.cxx:964 #19 0x00007fd67a84464e in TGClient::RegisterWindow (this=this entry=0x283a9c0, w=w entry=0x283b270) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/gui/gui/src/TGClient.cxx:514 #20 0x00007fd67a91293e in TGWindow::TGWindow (this=0x283b270, c=0x283a9c0, id=0, parent=0x0) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/gui/gui/src/TGWindow.cxx:92 #21 0x00007fd67a87900c in TGFrame::TGFrame (this=0x283b270, c=, id=0, parent=) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/gui/gui/src/TGFrame.cxx:202 #22 0x00007fd67a844855 in TGClient::TGClient (this=0x283a9c0, dpyName=) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/gui/gui/src/TGClient.cxx:171 #23 0x00007fd67a7d6339 in TGClientInit (this=) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/build_dir/include/TObject.h:158 #24 __static_initialization_and_destruction_0 (__initialize_p=1, __priority=65535) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/gui/gui/src/TGClient.cxx:84 #25 _GLOBAL__sub_I_TGClient.cxx(void) () at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/gui/gui/src/TGClient.cxx:965 #26 0x00007fd67ac303a3 in _dl_init_internal () from /lib64/ld-linux-x86-64.so.2 #27 0x00007fd67ac2246a in _dl_start_user () from /lib64/ld-linux-x86-64.so.2 #28 0x0000000000000005 in ?? () #29 0x00007fffe52eb62b in ?? () #30 0x00007fffe52eb633 in ?? () #31 0x00007fffe52eb647 in ?? () #32 0x00007fffe52eb654 in ?? () #33 0x00007fffe52eb67a in ?? () #34 0x0000000000000000 in ?? () =========================================================== Create plots /group/halld/Software/scripts/b1pi_test/b1pi_test.sh: line 114: 20507 Segmentation fault hd_root -PJANA:BATCH_MODE=1 --nthreads=$NTHREADS -PPLUGINS=b1pi_hists,monitoring_hists dana_rest.hddm Error in : getcwd() failed Error in : getcwd() failed Error in : getcwd() failed shell-init: error retrieving current directory: getcwd: cannot access parent directories: No such file or directory Error in : getcwd() failed shell-init: error retrieving current directory: getcwd: cannot access parent directories: No such file or directory Error in : getcwd() failed shell-init: error retrieving current directory: getcwd: cannot access parent directories: No such file or directory shell-init: error retrieving current directory: getcwd: cannot access parent directories: No such file or directory *** Break *** segmentation violation Error in : getcwd() failed shell-init: error retrieving current directory: getcwd: cannot access parent directories: No such file or directory Error in : getcwd() failed shell-init: error retrieving current directory: getcwd: cannot access parent directories: No such file or directory shell-init: error retrieving current directory: getcwd: cannot access parent directories: No such file or directory =========================================================== There was a crash. This is the entire stack trace of all threads: =========================================================== #0 0x00007f9c77896b0c in waitpid () from /lib64/libc.so.6 #1 0x00007f9c7781b092 in do_system () from /lib64/libc.so.6 #2 0x00007f9c78aba019 in TUnixSystem::StackTrace (this=0x1f8f8e0) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/core/unix/src/TUnixSystem.cxx:2324 #3 0x00007f9c78abbd1c in TUnixSystem::DispatchSignals (this=0x1f8f8e0, sig=kSigSegmentationViolation) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/core/unix/src/TUnixSystem.cxx:3562 #4 #5 0x00007f9c7793c3c1 in __strlen_sse2_pminub () from /lib64/libc.so.6 #6 0x00007f9c746056e1 in (anonymous namespace)::createCIImpl(std::unique_ptr >, int, char const* const*, char const*, bool) () from /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/lib/libCling.so #7 0x00007f9c7460691b in cling::CIFactory::createCI(llvm::StringRef, int, char const* const*, char const*) () from /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/lib/libCling.so #8 0x00007f9c745dcdc5 in cling::IncrementalParser::IncrementalParser(cling::Interpreter*, int, char const* const*, char const*) () from /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/lib/libCling.so #9 0x00007f9c74585df8 in cling::Interpreter::Interpreter(int, char const* const*, char const*, bool) () from /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/lib/libCling.so #10 0x00007f9c74518165 in TCling::TCling (this=0x1ff1940, name=, title=) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/core/meta/src/TCling.cxx:1098 #11 0x00007f9c745193de in CreateInterpreter (interpLibHandle=) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/core/meta/src/TCling.cxx:578 #12 0x00007f9c789493a8 in TROOT::InitInterpreter (this=0x7f9c78d96860 ) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/core/base/src/TROOT.cxx:1767 #13 0x00007f9c78949726 in ROOT::Internal::GetROOT2 () at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/core/base/src/TROOT.cxx:362 #14 0x00007f9c789bb9e5 in TApplication::TApplication (this=0x1fdf530, appClassName=0x4013a0 "Rint", argc=0x7ffc0c93bd9c, argv=0x7ffc0c93be98, numOptions=0) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/core/base/src/TApplication.cxx:144 #15 0x00007f9c785e7de1 in TRint::TRint (this=0x1fdf530, appClassName=, argc=, argv=, options=, numOptions=, noLogo=false) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/core/rint/src/TRint.cxx:143 #16 0x000000000040108e in main (argc=5, argv=0x7ffc0c93be98) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/main/src/rmain.cxx:27 =========================================================== #count events #count b1_pi.hddm /group/halld/Software/scripts/b1pi_test/b1pi_cron_one.sh: line 21: hddm_counter.pl: command not found #count hdgeant.hddm /group/halld/Software/scripts/b1pi_test/b1pi_cron_one.sh: line 22: hddm_counter.pl: command not found /group/halld/Software/scripts/b1pi_test/b1pi_cron_one.sh: line 23: hddm_counter.pl: command not found #count hdgeant_smeared.hddm #count dana_rest.hddm /group/halld/Software/scripts/b1pi_test/b1pi_cron_one.sh: line 24: hddm_counter.pl: command not found /group/halld/Software/scripts/b1pi_test/b1pi_cron_one.sh: line 25: hddm_counter.pl: command not found #count dana_rest_b1pi.hddm mkdir: created directory '/group/halld/www/halldweb/html/b1pi/2016-10-20/Linux_RHEL7-x86_64-gcc4.8.5' cp: cannot stat '*.pdf': Stale file handle cp: cannot stat '*.gif': Stale file handle cp: cannot stat '*.html': Stale file handle