Pseudo-terminal will not be allocated because stdin is not a terminal. mkdir: created directory '/u/scratch/gluex/b1pi/2016-09-29/Linux_RHEL7-x86_64-gcc4.8.5' info: number of threads not defined, using default value 1 info: vertex parameters not defined, using default values 0 0 50 80 NEVENTS = 1500 VERTEX = 0 0 50 80 NTHREADS = 1 B1PI_TEST_DIR = /group/halld/Software/scripts/b1pi_test Copying script files and macros ... '/group/halld/Software/scripts/b1pi_test/b1pi_cron_one.sh' -> './b1pi_cron_one.sh' '/group/halld/Software/scripts/b1pi_test/b1pi_cron_one.sh~' -> './b1pi_cron_one.sh~' '/group/halld/Software/scripts/b1pi_test/b1pi_cron.sh' -> './b1pi_cron.sh' '/group/halld/Software/scripts/b1pi_test/b1pi_cron.sh~' -> './b1pi_cron.sh~' '/group/halld/Software/scripts/b1pi_test/b1_pi.input' -> './b1_pi.input' '/group/halld/Software/scripts/b1pi_test/b1pi_message.sh' -> './b1pi_message.sh' '/group/halld/Software/scripts/b1pi_test/b1pi_test.sh' -> './b1pi_test.sh' '/group/halld/Software/scripts/b1pi_test/hddm_counter.pl' -> './hddm_counter.pl' '/group/halld/Software/scripts/b1pi_test/index.html' -> './index.html' cp: omitting directory '/group/halld/Software/scripts/b1pi_test/macros' '/group/halld/Software/scripts/b1pi_test/my_b1pi_test.sh' -> './my_b1pi_test.sh' '/group/halld/Software/scripts/b1pi_test/README' -> './README' '/group/halld/Software/scripts/b1pi_test/macros/anal1.C' -> './anal1.C' '/group/halld/Software/scripts/b1pi_test/macros/b1_pi.C' -> './b1_pi.C' '/group/halld/Software/scripts/b1pi_test/macros/b1pi_gen.C' -> './b1pi_gen.C' '/group/halld/Software/scripts/b1pi_test/macros/b1pi_gen.h' -> './b1pi_gen.h' '/group/halld/Software/scripts/b1pi_test/macros/b1_pi.h' -> './b1_pi.h' '/group/halld/Software/scripts/b1pi_test/macros/b1pi_rec.C' -> './b1pi_rec.C' '/group/halld/Software/scripts/b1pi_test/macros/b1pi_rec.h' -> './b1pi_rec.h' '/group/halld/Software/scripts/b1pi_test/macros/fit_voigt.C' -> './fit_voigt.C' '/group/halld/Software/scripts/b1pi_test/macros/makeallplots.C' -> './makeallplots.C' '/group/halld/Software/scripts/b1pi_test/macros/mass_X.C' -> './mass_X.C' '/group/halld/Software/scripts/b1pi_test/macros/mk_pics.C' -> './mk_pics.C' '/group/halld/Software/scripts/b1pi_test/macros/momentum.C' -> './momentum.C' '/group/halld/Software/scripts/b1pi_test/macros/StandardLabels.C' -> './StandardLabels.C' '/group/halld/Software/scripts/b1pi_test/macros/theta.C' -> './theta.C' Running genr8 ... Using runNo: 1501 Maximum number of events: 1500 Opening file b1_pi.ascii for output. Reading: beamp.x beamp.y beamp.z beamMass Found: 0.000000 0.000000 9.000000 0.000000 Reading: targetp.x targetp.y targetp.z targetMass Found: 0.000000 0.000000 0.000000 0.938000 Reading: t-channelSlope Found: 5.000000 Reading: number of particles need to describe the decay Found: 12 Reading: part# chld1# chld2# prnt# Id nchld mass width chrg flag Found: 0 -1 -1 -1 14 0 0.938000 0.000000 1 11 Found: 1 2 3 -1 0 2 2.000000 0.100000 1 0 Found: 2 4 5 1 0 2 1.235000 0.142000 1 0 Found: 3 4 5 1 9 0 0.140000 0.000000 -1 11 Found: 4 6 7 2 0 2 0.783000 0.009000 0 0 Found: 5 6 7 2 8 0 0.140000 0.000000 1 11 Found: 6 8 9 4 0 2 0.776000 0.150000 0 0 Found: 7 10 11 4 7 2 0.135000 0.000000 0 0 Found: 8 10 11 6 8 0 0.140000 0.000000 1 11 Found: 9 10 11 6 9 0 0.140000 0.000000 -1 11 Found: 10 10 11 7 1 0 0.000000 0.000000 0 11 Found: 11 10 11 7 1 0 0.000000 0.000000 0 11 Found EOI---- Input File appears Fine. Calculating Lorentz Factor: 9000 Calculating Lorentz Factor: 8000 Calculating Lorentz Factor: 7000 Calculating Lorentz Factor: 6000 Calculating Lorentz Factor: 5000 Calculating Lorentz Factor: 4000 Calculating Lorentz Factor: 3000 Calculating Lorentz Factor: 2000 Calculating Lorentz Factor: 1000 Calculating Lorentz Factor: 100 Calculating Lorentz Factor: 90 Calculating Lorentz Factor: 80 Calculating Lorentz Factor: 70 Calculating Lorentz Factor: 60 Calculating Lorentz Factor: 50 Calculating Lorentz Factor: 40 Calculating Lorentz Factor: 30 Calculating Lorentz Factor: 20 Calculating Lorentz Factor: 10 Calculating Lorentz Factor: 0 Events generated: 100 Events accepted: 40 Events generated: 200 Events accepted: 85 Events generated: 300 Events accepted: 127 Events generated: 400 Events accepted: 163 Events generated: 500 Events accepted: 209 Events generated: 600 Events accepted: 261 Events generated: 700 Events accepted: 298 Events generated: 800 Events accepted: 351 Events generated: 900 Events accepted: 405 Events generated: 1000 Events accepted: 457 Max Lorentz Factor:0.001292 Events generated:3271 Events accepted:1500 Setting random number seed to: 1475160354 Converting generated events to HDDM ... Wrote event 1000 Wrote 1500 events to b1_pi.hddm Creating control.in file ... Running hdgeant ... MZSTOR. ZEBRA table base TAB(0) in /MZCC/ at adr 18003863 112B797 HEX MZSTOR. Initialize Store 0 in /GCBANK/ with Store/Table at absolute adrs 12439837 18003863 HEX BDD11D 112B797 HEX FFAB17AA 0 relative adrs -5564502 0 with 1 Str. in 2 Links in 5300 Low words in 4999970 words. This store has a fence of 16 words. MZLOGL. Set Log Level 0 for store 0 MZSTOR. Initialize Store 1 in /PAWC/ with Store/Table at absolute adrs 7439825 12439416 HEX 7185D1 BDCF78 HEX FF5ECC5E FFAB17E1 relative adrs -10564514 -5564447 with 1 Str. in 1 Links in 5001 Low words in 4999990 words. This store has a fence of 5 words. MZLINK. Initialize Link Area /HCBOOK/ for Store 1 NL/NS= 49 4 MZDIV. Initialize Division HIGZ in Store 1 NW/NWMAX= 10005000000, MODE/KIND= 0 3 Division 20 initialized. MZLINK. Initialize Link Area /HILINK/ for Store 1 NL/NS= 42 2 Version 1.29/04 of HIGZ started 1***** GEANT Version 3.21/14 Released on 19032002 0***** Correction Cradle Version 0.1400 MODE VERSION 1.00 : MZDIV. Initialize Division Constant in Store 0 NW/NWMAX= 20004000000, MODE/KIND= 1 2 Division 20 initialized. MZLINK. Initialize Link Area /GCLINK/ for Store 0 NL/NS= 20 20 MZLINK. Initialize Link Area /GCSLNK/ for Store 0 NL/NS= 100 100 run number 1501 0 JANA >>Created JCalibration object of type: JCalibrationCCDB JANA >>Generated via: JCalibration using CCDB for MySQL and SQLite databases JANA >>Run:1501 JANA >>URL: mysql://ccdb_user@hallddb.jlab.org/ccdb JANA >>context: variation=mc JANA >>Reading Magnetic field map from Magnets/Solenoid/solenoid_1200A_poisson_20140520 ... Nx=251 Ny=1 Nz=701 ) at 0x6b940c0 Reading fine-mesh B-field data from /group/halld/www/halldweb/html/resources/Magnets/Solenoid/finemeshes/solenoid_1200A_poisson_20140520.evio rmin: 0 rmax: 88.5 dr: 0.1 zmin: 0 zmax: 600 dz: 0.1 Number of points in z = 6000 Number of points in r = 885 JANA >>175951 entries found (Creating DGeometry: JANA >> Run requested:1501 found:1501 JANA >> Run validity range: 1501-1501 JANA >> URL="xmlfile:///u/scratch/gluex/nightly/2016-09-29/Linux_RHEL7-x86_64-gcc4.8.5/hdds/main_HDDS.xml" context="default" JANA >> Type="JGeometryXML" JANA >>Found 18 material maps in calib. DB for run 1501 JANA >>Read in 18 material maps containing 62173 grid points total JANA >> JANA >>Reading Pair Spectrometer Magnetic field map from Magnets/PairSpectrometer/PS_1.8T_20150513_test ... Nx=40 Ny=1 Nz=121 ) at 0x6bba4c0 RZOPEN. record length: 65536 > maximum safe value (8191 words). RZOPEN. Automatic record length determination will not work with this file. RZOPEN. You may have problems transferring your file to other systems or writing it to tape. RZMAKE. Unit 1011 Initializing with LREC= 65536, OPT= X?C MZLINK. Initialize Link Area RZCL for Store 0 NL/NS= 11 0 MZLINK. Initialize Link Area /GCHVIR/ for Store 0 NL/NS= 4 1 MZLINK. Initialize Link Area /GCDINA/ for Store 0 NL/NS= 4 4 1************************************************************ * * * G E A N T Version 3.2114 DATE/TIME 160929/0800 * * * * R U N 1501 * * * ************************************************************ * * * Data structure Date Time GVERSN ZVERSN * * -------------- ---- ---- ------ ------ * * * * INIT 160929 0800 3.2114 3.79 * * * * KINE 160929 0800 3.2114 3.79 * * * * HITS 160929 0800 3.2114 3.79 * * * * DIGI 160929 0800 3.2114 3.79 * * * * Random number seeds: 1315342834 425995190 * * -------------------- * * * *----------------------------------------------------------* * * * Standard TPAR for this run are * * ------------------------------ * * * * CUTGAM= 1.00 MeV CUTELE= 1.00 MeV CUTNEU= 10.00 MeV * * CUTHAD= 10.00 MeV CUTMUO= 10.00 MeV * * BCUTE = 1.00 MeV BCUTM = 1.00 MeV * * DCUTE = 1.00 MeV DCUTM = 1.00 MeV PPCUTM= 10.00 MeV * * IPAIR = 1. ICOMP = 1. IPHOT = 1. * * IPFIS = 0. IDRAY = 1. IANNI = 1. * * IBREM = 1. IHADR = 1. IMUNU = 1. * * IDCAY = 1. ILOSS = 1. IMULS = 1. * * IRAYL = 0. ILABS = 0. ISYNC = 0. * * ISTRA = 0. * * * * * ************************************************************ RZMAKE. Unit 3 Initializing with LREC= 1024, OPT= ON X RZMAKE. new RZ format selected. This file will not be readable with versions of RZ prior to release 94B *** GROUT *** Data structure DRAW version 1 saved to disk *** GROUT *** Data structure MATE version 1 saved to disk *** GROUT *** Data structure PART version 1 saved to disk *** GROUT *** Data structure ROTM version 1 saved to disk *** GROUT *** Data structure RUNG version 1 saved to disk *** GROUT *** Data structure SETS was not found *** GROUT *** Data structure TMED version 1 saved to disk *** GROUT *** Data structure VOLU version 1 saved to disk *** GROUT *** Data structure SCAN was not found RZEND. called for LUN3 0 events simulated settofg: beam_bucket_period_ns set to 2.00400805 TAGGER: ALL parameters loaded from Data Base START: ALL parameters loaded from Data Base FDC: ALL parameters loaded from Data Base FCAL: ALL parameters loaded from Data Base CDC: ALL parameters loaded from Data Base BCAL/bcal_parms: ALL parameters loaded from Data Base BCAL/mc_parms: ALL parameters loaded from Data Base TOF: ALL parameters loaded from Data Base 10 events simulated 20 events simulated 30 events simulated WARNING: The BCAL records information about certain particles entering it so that information can be used later in mcsmear to properly smear the signals. For this event, more than the maximum number of incident particles has occurred (100) so the list is being truncated to the first 100. All of the signal in the BCAL is still being recorded, but the smearing may be off by a few percent for this event. It is probably nothing to worry about. This long message will only appear once and the following line just once per event whenever this occurs. programs/Simulation/HDGeant/hitBCal.cc:371 too many particles entering BCAL! Some information will be lost. 40 events simulated 50 events simulated 60 events simulated 70 events simulated 80 events simulated 90 events simulated 100 events simulated 200 events simulated 300 events simulated HDDM Error: error writing to output hddm file. 56214 bytes of 69244 actually written. Running mcsmear ... shell-init: error retrieving current directory: getcwd: cannot access parent directories: No such file or directory Error in : getcwd() failed shell-init: error retrieving current directory: getcwd: cannot access parent directories: No such file or directory Error in : getcwd() failed shell-init: error retrieving current directory: getcwd: cannot access parent directories: No such file or directory shell-init: error retrieving current directory: getcwd: cannot access parent directories: No such file or directory *** Break *** segmentation violation Error in : getcwd() failed shell-init: error retrieving current directory: getcwd: cannot access parent directories: No such file or directory Error in : getcwd() failed shell-init: error retrieving current directory: getcwd: cannot access parent directories: No such file or directory shell-init: error retrieving current directory: getcwd: cannot access parent directories: No such file or directory =========================================================== There was a crash. This is the entire stack trace of all threads: =========================================================== #0 0x00007f053c5c5b0c in waitpid () from /lib64/libc.so.6 #1 0x00007f053c54a092 in do_system () from /lib64/libc.so.6 #2 0x00007f054271c019 in TUnixSystem::StackTrace (this=0x1efc8e0) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/core/unix/src/TUnixSystem.cxx:2324 #3 0x00007f054271dd1c in TUnixSystem::DispatchSignals (this=0x1efc8e0, sig=kSigSegmentationViolation) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/core/unix/src/TUnixSystem.cxx:3562 #4 #5 0x00007f053c66b3c1 in __strlen_sse2_pminub () from /lib64/libc.so.6 #6 0x00007f05341216e1 in (anonymous namespace)::createCIImpl(std::unique_ptr >, int, char const* const*, char const*, bool) () from /group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.5/root/root-6.06.08/lib/libCling.so #7 0x00007f053412291b in cling::CIFactory::createCI(llvm::StringRef, int, char const* const*, char const*) () from /group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.5/root/root-6.06.08/lib/libCling.so #8 0x00007f05340f8dc5 in cling::IncrementalParser::IncrementalParser(cling::Interpreter*, int, char const* const*, char const*) () from /group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.5/root/root-6.06.08/lib/libCling.so #9 0x00007f05340a1df8 in cling::Interpreter::Interpreter(int, char const* const*, char const*, bool) () from /group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.5/root/root-6.06.08/lib/libCling.so #10 0x00007f0534034165 in TCling::TCling (this=0x1fa87b0, name=, title=) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/core/meta/src/TCling.cxx:1098 #11 0x00007f05340353de in CreateInterpreter (interpLibHandle=) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/core/meta/src/TCling.cxx:578 #12 0x00007f05425ab3a8 in TROOT::InitInterpreter (this=0x7f05429f8860 ) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/core/base/src/TROOT.cxx:1767 #13 0x00007f05425ab726 in ROOT::Internal::GetROOT2 () at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/core/base/src/TROOT.cxx:362 #14 0x00007f05426e8a16 in ROOT::TGenericClassInfo::GetClass (this=0x7f0543011080 ) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/core/meta/src/TGenericClassInfo.cxx:198 #15 0x00007f0542c01a3a in TGClient::Class () at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/build_dir/gui/gui/G__Gui.cxx:7078 #16 0x00007f054265a3d2 in TQObject::Emit (this=this entry=0x1f9a2e0, signal_name=signal_name entry=0x7f0542d33580 "RegisteredWindow(Window_t)", param=0) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/core/base/src/TQObject.cxx:607 #17 0x00007f0542c37613 in Emit (param=, signal=0x7f0542d33580 "RegisteredWindow(Window_t)", this=0x1f9a2e0) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/build_dir/include/TQObject.h:127 #18 TGClient::RegisteredWindow (this=this entry=0x1f9a2d0, w=) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/gui/gui/src/TGClient.cxx:964 #19 0x00007f0542c3764e in TGClient::RegisterWindow (this=this entry=0x1f9a2d0, w=w entry=0x1f9ab80) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/gui/gui/src/TGClient.cxx:514 #20 0x00007f0542d0593e in TGWindow::TGWindow (this=0x1f9ab80, c=0x1f9a2d0, id=0, parent=0x0) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/gui/gui/src/TGWindow.cxx:92 #21 0x00007f0542c6c00c in TGFrame::TGFrame (this=0x1f9ab80, c=, id=0, parent=) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/gui/gui/src/TGFrame.cxx:202 #22 0x00007f0542c37855 in TGClient::TGClient (this=0x1f9a2d0, dpyName=) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/gui/gui/src/TGClient.cxx:171 #23 0x00007f0542bc9339 in TGClientInit (this=) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/build_dir/include/TObject.h:158 #24 __static_initialization_and_destruction_0 (__initialize_p=1, __priority=65535) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/gui/gui/src/TGClient.cxx:84 #25 _GLOBAL__sub_I_TGClient.cxx(void) () at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/gui/gui/src/TGClient.cxx:965 #26 0x00007f05430233a3 in _dl_init_internal () from /lib64/ld-linux-x86-64.so.2 #27 0x00007f054301546a in _dl_start_user () from /lib64/ld-linux-x86-64.so.2 #28 0x0000000000000003 in ?? () #29 0x00007fff2ca895f7 in ?? () #30 0x00007fff2ca895ff in ?? () #31 0x00007fff2ca89613 in ?? () #32 0x0000000000000000 in ?? () =========================================================== /group/halld/Software/scripts/b1pi_test/b1pi_test.sh: line 108: 9975 Segmentation fault mcsmear -PJANA:BATCH_MODE=1 hdgeant.hddm Running hd_root with danarest ... Error in : getcwd() failed Error in : getcwd() failed Error in : getcwd() failed shell-init: error retrieving current directory: getcwd: cannot access parent directories: No such file or directory Error in : getcwd() failed shell-init: error retrieving current directory: getcwd: cannot access parent directories: No such file or directory Error in : getcwd() failed shell-init: error retrieving current directory: getcwd: cannot access parent directories: No such file or directory shell-init: error retrieving current directory: getcwd: cannot access parent directories: No such file or directory *** Break *** segmentation violation Error in : getcwd() failed shell-init: error retrieving current directory: getcwd: cannot access parent directories: No such file or directory Error in : getcwd() failed shell-init: error retrieving current directory: getcwd: cannot access parent directories: No such file or directory shell-init: error retrieving current directory: getcwd: cannot access parent directories: No such file or directory =========================================================== There was a crash. This is the entire stack trace of all threads: =========================================================== #0 0x00007fec9a6b3b0c in waitpid () from /lib64/libc.so.6 #1 0x00007fec9a638092 in do_system () from /lib64/libc.so.6 #2 0x00007feca080a019 in TUnixSystem::StackTrace (this=0x19e48e0) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/core/unix/src/TUnixSystem.cxx:2324 #3 0x00007feca080bd1c in TUnixSystem::DispatchSignals (this=0x19e48e0, sig=kSigSegmentationViolation) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/core/unix/src/TUnixSystem.cxx:3562 #4 #5 0x00007fec9a7593c1 in __strlen_sse2_pminub () from /lib64/libc.so.6 #6 0x00007fec9220f6e1 in (anonymous namespace)::createCIImpl(std::unique_ptr >, int, char const* const*, char const*, bool) () from /group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.5/root/root-6.06.08/lib/libCling.so #7 0x00007fec9221091b in cling::CIFactory::createCI(llvm::StringRef, int, char const* const*, char const*) () from /group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.5/root/root-6.06.08/lib/libCling.so #8 0x00007fec921e6dc5 in cling::IncrementalParser::IncrementalParser(cling::Interpreter*, int, char const* const*, char const*) () from /group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.5/root/root-6.06.08/lib/libCling.so #9 0x00007fec9218fdf8 in cling::Interpreter::Interpreter(int, char const* const*, char const*, bool) () from /group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.5/root/root-6.06.08/lib/libCling.so #10 0x00007fec92122165 in TCling::TCling (this=0x1a906b0, name=, title=) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/core/meta/src/TCling.cxx:1098 #11 0x00007fec921233de in CreateInterpreter (interpLibHandle=) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/core/meta/src/TCling.cxx:578 #12 0x00007feca06993a8 in TROOT::InitInterpreter (this=0x7feca0ae6860 ) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/core/base/src/TROOT.cxx:1767 #13 0x00007feca0699726 in ROOT::Internal::GetROOT2 () at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/core/base/src/TROOT.cxx:362 #14 0x00007feca07d6a16 in ROOT::TGenericClassInfo::GetClass (this=0x7feca10ff080 ) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/core/meta/src/TGenericClassInfo.cxx:198 #15 0x00007feca0cefa3a in TGClient::Class () at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/build_dir/gui/gui/G__Gui.cxx:7078 #16 0x00007feca07483d2 in TQObject::Emit (this=this entry=0x1a829d0, signal_name=signal_name entry=0x7feca0e21580 "RegisteredWindow(Window_t)", param=0) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/core/base/src/TQObject.cxx:607 #17 0x00007feca0d25613 in Emit (param=, signal=0x7feca0e21580 "RegisteredWindow(Window_t)", this=0x1a829d0) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/build_dir/include/TQObject.h:127 #18 TGClient::RegisteredWindow (this=this entry=0x1a829c0, w=) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/gui/gui/src/TGClient.cxx:964 #19 0x00007feca0d2564e in TGClient::RegisterWindow (this=this entry=0x1a829c0, w=w entry=0x1a83270) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/gui/gui/src/TGClient.cxx:514 #20 0x00007feca0df393e in TGWindow::TGWindow (this=0x1a83270, c=0x1a829c0, id=0, parent=0x0) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/gui/gui/src/TGWindow.cxx:92 #21 0x00007feca0d5a00c in TGFrame::TGFrame (this=0x1a83270, c=, id=0, parent=) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/gui/gui/src/TGFrame.cxx:202 #22 0x00007feca0d25855 in TGClient::TGClient (this=0x1a829c0, dpyName=) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/gui/gui/src/TGClient.cxx:171 #23 0x00007feca0cb7339 in TGClientInit (this=) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/build_dir/include/TObject.h:158 #24 __static_initialization_and_destruction_0 (__initialize_p=1, __priority=65535) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/gui/gui/src/TGClient.cxx:84 #25 _GLOBAL__sub_I_TGClient.cxx(void) () at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/gui/gui/src/TGClient.cxx:965 #26 0x00007feca11113a3 in _dl_init_internal () from /lib64/ld-linux-x86-64.so.2 #27 0x00007feca110346a in _dl_start_user () from /lib64/ld-linux-x86-64.so.2 #28 0x0000000000000005 in ?? () #29 0x00007fffc530f5cf in ?? () #30 0x00007fffc530f5d7 in ?? () #31 0x00007fffc530f5eb in ?? () #32 0x00007fffc530f5f8 in ?? () #33 0x00007fffc530f60b in ?? () #34 0x0000000000000000 in ?? () =========================================================== Running hd_root with b1pi_hists & monitoring_hists ... /group/halld/Software/scripts/b1pi_test/b1pi_test.sh: line 111: 10141 Segmentation fault hd_root -PJANA:BATCH_MODE=1 --nthreads=$NTHREADS -PPLUGINS=danarest hdgeant_smeared.hddm Error in : getcwd() failed Error in : getcwd() failed Error in : getcwd() failed shell-init: error retrieving current directory: getcwd: cannot access parent directories: No such file or directory Error in : getcwd() failed shell-init: error retrieving current directory: getcwd: cannot access parent directories: No such file or directory Error in : getcwd() failed shell-init: error retrieving current directory: getcwd: cannot access parent directories: No such file or directory shell-init: error retrieving current directory: getcwd: cannot access parent directories: No such file or directory *** Break *** segmentation violation Error in : getcwd() failed shell-init: error retrieving current directory: getcwd: cannot access parent directories: No such file or directory Error in : getcwd() failed shell-init: error retrieving current directory: getcwd: cannot access parent directories: No such file or directory shell-init: error retrieving current directory: getcwd: cannot access parent directories: No such file or directory =========================================================== There was a crash. This is the entire stack trace of all threads: =========================================================== #0 0x00007fc557a39b0c in waitpid () from /lib64/libc.so.6 #1 0x00007fc5579be092 in do_system () from /lib64/libc.so.6 #2 0x00007fc55db90019 in TUnixSystem::StackTrace (this=0x13d08e0) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/core/unix/src/TUnixSystem.cxx:2324 #3 0x00007fc55db91d1c in TUnixSystem::DispatchSignals (this=0x13d08e0, sig=kSigSegmentationViolation) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/core/unix/src/TUnixSystem.cxx:3562 #4 #5 0x00007fc557adf3c1 in __strlen_sse2_pminub () from /lib64/libc.so.6 #6 0x00007fc54f5956e1 in (anonymous namespace)::createCIImpl(std::unique_ptr >, int, char const* const*, char const*, bool) () from /group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.5/root/root-6.06.08/lib/libCling.so #7 0x00007fc54f59691b in cling::CIFactory::createCI(llvm::StringRef, int, char const* const*, char const*) () from /group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.5/root/root-6.06.08/lib/libCling.so #8 0x00007fc54f56cdc5 in cling::IncrementalParser::IncrementalParser(cling::Interpreter*, int, char const* const*, char const*) () from /group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.5/root/root-6.06.08/lib/libCling.so #9 0x00007fc54f515df8 in cling::Interpreter::Interpreter(int, char const* const*, char const*, bool) () from /group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.5/root/root-6.06.08/lib/libCling.so #10 0x00007fc54f4a8165 in TCling::TCling (this=0x147c6b0, name=, title=) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/core/meta/src/TCling.cxx:1098 #11 0x00007fc54f4a93de in CreateInterpreter (interpLibHandle=) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/core/meta/src/TCling.cxx:578 #12 0x00007fc55da1f3a8 in TROOT::InitInterpreter (this=0x7fc55de6c860 ) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/core/base/src/TROOT.cxx:1767 #13 0x00007fc55da1f726 in ROOT::Internal::GetROOT2 () at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/core/base/src/TROOT.cxx:362 #14 0x00007fc55db5ca16 in ROOT::TGenericClassInfo::GetClass (this=0x7fc55e485080 ) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/core/meta/src/TGenericClassInfo.cxx:198 #15 0x00007fc55e075a3a in TGClient::Class () at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/build_dir/gui/gui/G__Gui.cxx:7078 #16 0x00007fc55dace3d2 in TQObject::Emit (this=this entry=0x146e9d0, signal_name=signal_name entry=0x7fc55e1a7580 "RegisteredWindow(Window_t)", param=0) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/core/base/src/TQObject.cxx:607 #17 0x00007fc55e0ab613 in Emit (param=, signal=0x7fc55e1a7580 "RegisteredWindow(Window_t)", this=0x146e9d0) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/build_dir/include/TQObject.h:127 #18 TGClient::RegisteredWindow (this=this entry=0x146e9c0, w=) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/gui/gui/src/TGClient.cxx:964 #19 0x00007fc55e0ab64e in TGClient::RegisterWindow (this=this entry=0x146e9c0, w=w entry=0x146f270) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/gui/gui/src/TGClient.cxx:514 #20 0x00007fc55e17993e in TGWindow::TGWindow (this=0x146f270, c=0x146e9c0, id=0, parent=0x0) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/gui/gui/src/TGWindow.cxx:92 #21 0x00007fc55e0e000c in TGFrame::TGFrame (this=0x146f270, c=, id=0, parent=) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/gui/gui/src/TGFrame.cxx:202 #22 0x00007fc55e0ab855 in TGClient::TGClient (this=0x146e9c0, dpyName=) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/gui/gui/src/TGClient.cxx:171 #23 0x00007fc55e03d339 in TGClientInit (this=) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/build_dir/include/TObject.h:158 #24 __static_initialization_and_destruction_0 (__initialize_p=1, __priority=65535) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/gui/gui/src/TGClient.cxx:84 #25 _GLOBAL__sub_I_TGClient.cxx(void) () at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/gui/gui/src/TGClient.cxx:965 #26 0x00007fc55e4973a3 in _dl_init_internal () from /lib64/ld-linux-x86-64.so.2 #27 0x00007fc55e48946a in _dl_start_user () from /lib64/ld-linux-x86-64.so.2 #28 0x0000000000000005 in ?? () #29 0x00007ffe11e415c2 in ?? () #30 0x00007ffe11e415ca in ?? () #31 0x00007ffe11e415de in ?? () #32 0x00007ffe11e415eb in ?? () #33 0x00007ffe11e41611 in ?? () #34 0x0000000000000000 in ?? () =========================================================== Create plots /group/halld/Software/scripts/b1pi_test/b1pi_test.sh: line 114: 10296 Segmentation fault hd_root -PJANA:BATCH_MODE=1 --nthreads=$NTHREADS -PPLUGINS=b1pi_hists,monitoring_hists dana_rest.hddm Error in : getcwd() failed Error in : getcwd() failed Error in : getcwd() failed shell-init: error retrieving current directory: getcwd: cannot access parent directories: No such file or directory Error in : getcwd() failed shell-init: error retrieving current directory: getcwd: cannot access parent directories: No such file or directory Error in : getcwd() failed shell-init: error retrieving current directory: getcwd: cannot access parent directories: No such file or directory shell-init: error retrieving current directory: getcwd: cannot access parent directories: No such file or directory *** Break *** segmentation violation Error in : getcwd() failed shell-init: error retrieving current directory: getcwd: cannot access parent directories: No such file or directory Error in : getcwd() failed shell-init: error retrieving current directory: getcwd: cannot access parent directories: No such file or directory shell-init: error retrieving current directory: getcwd: cannot access parent directories: No such file or directory =========================================================== There was a crash. This is the entire stack trace of all threads: =========================================================== #0 0x00007f592df43b0c in waitpid () from /lib64/libc.so.6 #1 0x00007f592dec8092 in do_system () from /lib64/libc.so.6 #2 0x00007f592f167019 in TUnixSystem::StackTrace (this=0x22bf8e0) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/core/unix/src/TUnixSystem.cxx:2324 #3 0x00007f592f168d1c in TUnixSystem::DispatchSignals (this=0x22bf8e0, sig=kSigSegmentationViolation) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/core/unix/src/TUnixSystem.cxx:3562 #4 #5 0x00007f592dfe93c1 in __strlen_sse2_pminub () from /lib64/libc.so.6 #6 0x00007f592acb26e1 in (anonymous namespace)::createCIImpl(std::unique_ptr >, int, char const* const*, char const*, bool) () from /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/lib/libCling.so #7 0x00007f592acb391b in cling::CIFactory::createCI(llvm::StringRef, int, char const* const*, char const*) () from /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/lib/libCling.so #8 0x00007f592ac89dc5 in cling::IncrementalParser::IncrementalParser(cling::Interpreter*, int, char const* const*, char const*) () from /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/lib/libCling.so #9 0x00007f592ac32df8 in cling::Interpreter::Interpreter(int, char const* const*, char const*, bool) () from /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/lib/libCling.so #10 0x00007f592abc5165 in TCling::TCling (this=0x2321940, name=, title=) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/core/meta/src/TCling.cxx:1098 #11 0x00007f592abc63de in CreateInterpreter (interpLibHandle=) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/core/meta/src/TCling.cxx:578 #12 0x00007f592eff63a8 in TROOT::InitInterpreter (this=0x7f592f443860 ) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/core/base/src/TROOT.cxx:1767 #13 0x00007f592eff6726 in ROOT::Internal::GetROOT2 () at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/core/base/src/TROOT.cxx:362 #14 0x00007f592f0689e5 in TApplication::TApplication (this=0x230f530, appClassName=0x4013a0 "Rint", argc=0x7ffed2c0081c, argv=0x7ffed2c00918, numOptions=0) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/core/base/src/TApplication.cxx:144 #15 0x00007f592ec94de1 in TRint::TRint (this=0x230f530, appClassName=, argc=, argv=, options=, numOptions=, noLogo=false) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/core/rint/src/TRint.cxx:143 #16 0x000000000040108e in main (argc=5, argv=0x7ffed2c00918) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/main/src/rmain.cxx:27 =========================================================== #count events /group/halld/Software/scripts/b1pi_test/b1pi_cron_one.sh: line 21: hddm_counter.pl: command not found #count b1_pi.hddm /group/halld/Software/scripts/b1pi_test/b1pi_cron_one.sh: line 22: hddm_counter.pl: command not found #count hdgeant.hddm /group/halld/Software/scripts/b1pi_test/b1pi_cron_one.sh: line 23: hddm_counter.pl: command not found #count hdgeant_smeared.hddm /group/halld/Software/scripts/b1pi_test/b1pi_cron_one.sh: line 24: hddm_counter.pl: command not found #count dana_rest.hddm /group/halld/Software/scripts/b1pi_test/b1pi_cron_one.sh: line 25: hddm_counter.pl: command not found #count dana_rest_b1pi.hddm mkdir: created directory '/group/halld/www/halldweb/html/b1pi/2016-09-29/Linux_RHEL7-x86_64-gcc4.8.5' cp: cannot stat '*.pdf': Stale file handle cp: cannot stat '*.gif': Stale file handle cp: cannot stat '*.html': Stale file handle