Pseudo-terminal will not be allocated because stdin is not a terminal. ======= version mismatch found ======= == package being checked = jana == prerequisite package = root == prerequisite's home directory = /group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.5/root/root-6.06.08 == prerequisite version in home directory name = 6.06.08 == jana's prerequisite xml file = /group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.5/jana/jana_0.7.5p2/Linux_RHEL7-x86_64-gcc4.8.5/jana_prereqs_version.xml == root version recorded in prerequisite xml file = 5.34.34 mkdir: created directory '/u/scratch/gluex/b1pi/2016-09-22/Linux_RHEL7-x86_64-gcc4.8.5' info: number of threads not defined, using default value 1 info: vertex parameters not defined, using default values 0 0 50 80 NEVENTS = 150000 VERTEX = 0 0 50 80 NTHREADS = 1 B1PI_TEST_DIR = /group/halld/Software/scripts/b1pi_test Copying script files and macros ... '/group/halld/Software/scripts/b1pi_test/b1pi_cron_one.sh' -> './b1pi_cron_one.sh' '/group/halld/Software/scripts/b1pi_test/b1pi_cron.sh' -> './b1pi_cron.sh' '/group/halld/Software/scripts/b1pi_test/b1pi_cron.sh~' -> './b1pi_cron.sh~' '/group/halld/Software/scripts/b1pi_test/b1_pi.input' -> './b1_pi.input' '/group/halld/Software/scripts/b1pi_test/b1pi_message.sh' -> './b1pi_message.sh' '/group/halld/Software/scripts/b1pi_test/b1pi_test.sh' -> './b1pi_test.sh' '/group/halld/Software/scripts/b1pi_test/hddm_counter.pl' -> './hddm_counter.pl' '/group/halld/Software/scripts/b1pi_test/index.html' -> './index.html' cp: omitting directory '/group/halld/Software/scripts/b1pi_test/macros' '/group/halld/Software/scripts/b1pi_test/my_b1pi_test.sh' -> './my_b1pi_test.sh' '/group/halld/Software/scripts/b1pi_test/README' -> './README' '/group/halld/Software/scripts/b1pi_test/macros/anal1.C' -> './anal1.C' '/group/halld/Software/scripts/b1pi_test/macros/b1_pi.C' -> './b1_pi.C' '/group/halld/Software/scripts/b1pi_test/macros/b1pi_gen.C' -> './b1pi_gen.C' '/group/halld/Software/scripts/b1pi_test/macros/b1pi_gen.h' -> './b1pi_gen.h' '/group/halld/Software/scripts/b1pi_test/macros/b1_pi.h' -> './b1_pi.h' '/group/halld/Software/scripts/b1pi_test/macros/b1pi_rec.C' -> './b1pi_rec.C' '/group/halld/Software/scripts/b1pi_test/macros/b1pi_rec.h' -> './b1pi_rec.h' '/group/halld/Software/scripts/b1pi_test/macros/fit_voigt.C' -> './fit_voigt.C' '/group/halld/Software/scripts/b1pi_test/macros/makeallplots.C' -> './makeallplots.C' '/group/halld/Software/scripts/b1pi_test/macros/mass_X.C' -> './mass_X.C' '/group/halld/Software/scripts/b1pi_test/macros/mk_pics.C' -> './mk_pics.C' '/group/halld/Software/scripts/b1pi_test/macros/momentum.C' -> './momentum.C' '/group/halld/Software/scripts/b1pi_test/macros/StandardLabels.C' -> './StandardLabels.C' '/group/halld/Software/scripts/b1pi_test/macros/theta.C' -> './theta.C' Running genr8 ... Using runNo: 1501 Maximum number of events: 150000 Opening file b1_pi.ascii for output. Reading: beamp.x beamp.y beamp.z beamMass Found: 0.000000 0.000000 9.000000 0.000000 Reading: targetp.x targetp.y targetp.z targetMass Found: 0.000000 0.000000 0.000000 0.938000 Reading: t-channelSlope Found: 5.000000 Reading: number of particles need to describe the decay Found: 12 Reading: part# chld1# chld2# prnt# Id nchld mass width chrg flag Found: 0 -1 -1 -1 14 0 0.938000 0.000000 1 11 Found: 1 2 3 -1 0 2 2.000000 0.100000 1 0 Found: 2 4 5 1 0 2 1.235000 0.142000 1 0 Found: 3 4 5 1 9 0 0.140000 0.000000 -1 11 Found: 4 6 7 2 0 2 0.783000 0.009000 0 0 Found: 5 6 7 2 8 0 0.140000 0.000000 1 11 Found: 6 8 9 4 0 2 0.776000 0.150000 0 0 Found: 7 10 11 4 7 2 0.135000 0.000000 0 0 Found: 8 10 11 6 8 0 0.140000 0.000000 1 11 Found: 9 10 11 6 9 0 0.140000 0.000000 -1 11 Found: 10 10 11 7 1 0 0.000000 0.000000 0 11 Found: 11 10 11 7 1 0 0.000000 0.000000 0 11 Found EOI---- Input File appears Fine. Calculating Lorentz Factor: 9000 Calculating Lorentz Factor: 8000 Calculating Lorentz Factor: 7000 Calculating Lorentz Factor: 6000 Calculating Lorentz Factor: 5000 Calculating Lorentz Factor: 4000 Calculating Lorentz Factor: 3000 Calculating Lorentz Factor: 2000 Calculating Lorentz Factor: 1000 Calculating Lorentz Factor: 100 Calculating Lorentz Factor: 90 Calculating Lorentz Factor: 80 Calculating Lorentz Factor: 70 Calculating Lorentz Factor: 60 Calculating Lorentz Factor: 50 Calculating Lorentz Factor: 40 Calculating Lorentz Factor: 30 Calculating Lorentz Factor: 20 Calculating Lorentz Factor: 10 Calculating Lorentz Factor: 0 Events generated: 100 Events accepted: 48 Events generated: 200 Events accepted: 100 Events generated: 300 Events accepted: 147 Events generated: 400 Events accepted: 197 Events generated: 500 Events accepted: 243 Events generated: 600 Events accepted: 296 Events generated: 700 Events accepted: 334 Events generated: 800 Events accepted: 383 Events generated: 900 Events accepted: 428 Events generated: 1000 Events accepted: 471 Events generated: 10000 Events accepted: 4603 Events generated: 20000 Events accepted: 9202 Events generated: 30000 Events accepted: 13872 Events generated: 40000 Events accepted: 18531 Events generated: 50000 Events accepted: 23094 Events generated: 60000 Events accepted: 27692 Events generated: 70000 Events accepted: 32267 Events generated: 80000 Events accepted: 36862 Events generated: 90000 Events accepted: 41428 Events generated: 100000 Events accepted: 46014 Events generated: 110000 Events accepted: 50587 Events generated: 120000 Events accepted: 55180 Events generated: 130000 Events accepted: 59824 Events generated: 140000 Events accepted: 64458 Events generated: 150000 Events accepted: 69070 Events generated: 160000 Events accepted: 73748 Events generated: 170000 Events accepted: 78302 Events generated: 180000 Events accepted: 82884 Events generated: 190000 Events accepted: 87512 Events generated: 200000 Events accepted: 92125 Events generated: 210000 Events accepted: 96671 Events generated: 220000 Events accepted: 101280 Events generated: 230000 Events accepted: 105906 Events generated: 240000 Events accepted: 110482 Events generated: 250000 Events accepted: 115119 Events generated: 260000 Events accepted: 119548 Events generated: 270000 Events accepted: 124103 Events generated: 280000 Events accepted: 128708 Events generated: 290000 Events accepted: 133242 Events generated: 300000 Events accepted: 137897 Events generated: 310000 Events accepted: 142393 Events generated: 320000 Events accepted: 147027 Max Lorentz Factor:0.001311 Events generated:326590 Events accepted:150000 Setting random number seed to: 1474566639 Converting generated events to HDDM ... Wrote event 1000 Wrote event 2000 Wrote event 3000 Wrote event 4000 Wrote event 5000 Wrote event 6000 Wrote event 7000 Wrote event 8000 Wrote event 9000 Wrote event 10000 Wrote event 11000 Wrote event 12000 Wrote event 13000 Wrote event 14000 Wrote event 15000 Wrote event 16000 Wrote event 17000 Wrote event 18000 Wrote event 19000 Wrote event 20000 Wrote event 21000 Wrote event 22000 Wrote event 23000 Wrote event 24000 Wrote event 25000 Wrote event 26000 Wrote event 27000 Wrote event 28000 Wrote event 29000 Wrote event 30000 Wrote event 31000 Wrote event 32000 Wrote event 33000 Wrote event 34000 Wrote event 35000 Wrote event 36000 Wrote event 37000 Wrote event 38000 Wrote event 39000 Wrote event 40000 Wrote event 41000 Wrote event 42000 Wrote event 43000 Wrote event 44000 Wrote event 45000 Wrote event 46000 Wrote event 47000 Wrote event 48000 Wrote event 49000 Wrote event 50000 Wrote event 51000 Wrote event 52000 Wrote event 53000 Wrote event 54000 Wrote event 55000 Wrote event 56000 Wrote event 57000 Wrote event 58000 Wrote event 59000 Wrote event 60000 Wrote event 61000 Wrote event 62000 Wrote event 63000 Wrote event 64000 Wrote event 65000 Wrote event 66000 Wrote event 67000 Wrote event 68000 Wrote event 69000 Wrote event 70000 Wrote event 71000 Wrote event 72000 Wrote event 73000 Wrote event 74000 Wrote event 75000 Wrote event 76000 Wrote event 77000 Wrote event 78000 Wrote event 79000 Wrote event 80000 Wrote event 81000 Wrote event 82000 Wrote event 83000 Wrote event 84000 Wrote event 85000 Wrote event 86000 Wrote event 87000 Wrote event 88000 Wrote event 89000 Wrote event 90000 Wrote event 91000 Wrote event 92000 Wrote event 93000 Wrote event 94000 Wrote event 95000 Wrote event 96000 Wrote event 97000 Wrote event 98000 Wrote event 99000 Wrote event 100000 Wrote event 101000 Wrote event 102000 Wrote event 103000 Wrote event 104000 Wrote event 105000 Wrote event 106000 Wrote event 107000 Wrote event 108000 Wrote event 109000 Wrote event 110000 Wrote event 111000 Wrote event 112000 Wrote event 113000 Wrote event 114000 Wrote event 115000 Wrote event 116000 Wrote event 117000 Wrote event 118000 Wrote event 119000 Wrote event 120000 Wrote event 121000 Wrote event 122000 Wrote event 123000 Wrote event 124000 Wrote event 125000 Wrote event 126000 Wrote event 127000 Wrote event 128000 Wrote event 129000 Wrote event 130000 Wrote event 131000 Wrote event 132000 Wrote event 133000 Wrote event 134000 Wrote event 135000 Wrote event 136000 Wrote event 137000 Wrote event 138000 Wrote event 139000 Wrote event 140000 Wrote event 141000 Wrote event 142000 Wrote event 143000 Wrote event 144000 Wrote event 145000 Wrote event 146000 Wrote event 147000 Wrote event 148000 Wrote event 149000 Wrote event 150000 Wrote 150000 events to b1_pi.hddm Creating control.in file ... Running hdgeant ... MZSTOR. ZEBRA table base TAB(0) in /MZCC/ at adr 17998751 112A39F HEX MZSTOR. Initialize Store 0 in /GCBANK/ with Store/Table at absolute adrs 12434725 17998751 HEX BDBD25 112A39F HEX FFAB17AA 0 relative adrs -5564502 0 with 1 Str. in 2 Links in 5300 Low words in 4999970 words. This store has a fence of 16 words. MZLOGL. Set Log Level 0 for store 0 MZSTOR. Initialize Store 1 in /PAWC/ with Store/Table at absolute adrs 7434713 12434304 HEX 7171D9 BDBB80 HEX FF5ECC5E FFAB17E1 relative adrs -10564514 -5564447 with 1 Str. in 1 Links in 5001 Low words in 4999990 words. This store has a fence of 5 words. MZLINK. Initialize Link Area /HCBOOK/ for Store 1 NL/NS= 49 4 MZDIV. Initialize Division HIGZ in Store 1 NW/NWMAX= 10005000000, MODE/KIND= 0 3 Division 20 initialized. MZLINK. Initialize Link Area /HILINK/ for Store 1 NL/NS= 42 2 Version 1.29/04 of HIGZ started 1***** GEANT Version 3.21/14 Released on 19032002 0***** Correction Cradle Version 0.1400 MODE VERSION 1.00 : MZDIV. Initialize Division Constant in Store 0 NW/NWMAX= 20004000000, MODE/KIND= 1 2 Division 20 initialized. MZLINK. Initialize Link Area /GCLINK/ for Store 0 NL/NS= 20 20 MZLINK. Initialize Link Area /GCSLNK/ for Store 0 NL/NS= 100 100 run number 1501 0 JANA >>Created JCalibration object of type: JCalibrationCCDB JANA >>Generated via: JCalibration using CCDB for MySQL and SQLite databases JANA >>Run:1501 JANA >>URL: mysql://ccdb_user@hallddb.jlab.org/ccdb JANA >>context: variation=mc JANA >>Reading Magnetic field map from Magnets/Solenoid/solenoid_1200A_poisson_20140520 ... Nx=251 Ny=1 Nz=701 ) at 0x7a16010 Reading fine-mesh B-field data from /tmp/gluex/resources/Magnets/Solenoid/finemeshes/solenoid_1200A_poisson_20140520.evio rmin: 0 rmax: 88.5 dr: 0.1 zmin: 0 zmax: 600 dz: 0.1 Number of points in z = 6000 Number of points in r = 885 JANA >>175951 entries found (Creating DGeometry: JANA >> Run requested:1501 found:1501 JANA >> Run validity range: 1501-1501 JANA >> URL="xmlfile:///u/scratch/gluex/nightly/2016-09-22/Linux_RHEL7-x86_64-gcc4.8.5/hdds/main_HDDS.xml" context="default" JANA >> Type="JGeometryXML" JANA >>Found 18 material maps in calib. DB for run 1501 JANA >>Read in 18 material maps containing 62173 grid points total JANA >> JANA >>Reading Pair Spectrometer Magnetic field map from Magnets/PairSpectrometer/PS_1.8T_20150513_test ... Nx=40 Ny=1 Nz=121 ) at 0xbb5c9c0 RZOPEN. record length: 65536 > maximum safe value (8191 words). RZOPEN. Automatic record length determination will not work with this file. RZOPEN. You may have problems transferring your file to other systems or writing it to tape. RZMAKE. Unit 1011 Initializing with LREC= 65536, OPT= X?C MZLINK. Initialize Link Area RZCL for Store 0 NL/NS= 11 0 MZLINK. Initialize Link Area /GCHVIR/ for Store 0 NL/NS= 4 1 MZLINK. Initialize Link Area /GCDINA/ for Store 0 NL/NS= 4 4 1************************************************************ * * * G E A N T Version 3.2114 DATE/TIME 160922/0800 * * * * R U N 1501 * * * ************************************************************ * * * Data structure Date Time GVERSN ZVERSN * * -------------- ---- ---- ------ ------ * * * * INIT 160922 0800 3.2114 3.79 * * * * KINE 160922 0800 3.2114 3.79 * * * * HITS 160922 0800 3.2114 3.79 * * * * DIGI 160922 0800 3.2114 3.79 * * * * Random number seeds: 1315342834 425995190 * * -------------------- * * * *----------------------------------------------------------* * * * Standard TPAR for this run are * * ------------------------------ * * * * CUTGAM= 1.00 MeV CUTELE= 1.00 MeV CUTNEU= 10.00 MeV * * CUTHAD= 10.00 MeV CUTMUO= 10.00 MeV * * BCUTE = 1.00 MeV BCUTM = 1.00 MeV * * DCUTE = 1.00 MeV DCUTM = 1.00 MeV PPCUTM= 10.00 MeV * * IPAIR = 1. ICOMP = 1. IPHOT = 1. * * IPFIS = 0. IDRAY = 1. IANNI = 1. * * IBREM = 1. IHADR = 1. IMUNU = 1. * * IDCAY = 1. ILOSS = 1. IMULS = 1. * * IRAYL = 0. ILABS = 0. ISYNC = 0. * * ISTRA = 0. * * * * * ************************************************************ RZMAKE. Unit 3 Initializing with LREC= 1024, OPT= ON X RZMAKE. new RZ format selected. This file will not be readable with versions of RZ prior to release 94B *** GROUT *** Data structure DRAW version 1 saved to disk *** GROUT *** Data structure MATE version 1 saved to disk *** GROUT *** Data structure PART version 1 saved to disk *** GROUT *** Data structure ROTM version 1 saved to disk *** GROUT *** Data structure RUNG version 1 saved to disk *** GROUT *** Data structure SETS was not found *** GROUT *** Data structure TMED version 1 saved to disk *** GROUT *** Data structure VOLU version 1 saved to disk *** GROUT *** Data structure SCAN was not found RZEND. called for LUN3 0 events simulated settofg: beam_bucket_period_ns set to 2.00400805 TAGGER: ALL parameters loaded from Data Base START: ALL parameters loaded from Data Base CDC: ALL parameters loaded from Data Base BCAL/bcal_parms: ALL parameters loaded from Data Base BCAL/mc_parms: ALL parameters loaded from Data Base FDC: ALL parameters loaded from Data Base TOF: ALL parameters loaded from Data Base FCAL: ALL parameters loaded from Data Base 10 events simulated 20 events simulated 30 events simulated WARNING: The BCAL records information about certain particles entering it so that information can be used later in mcsmear to properly smear the signals. For this event, more than the maximum number of incident particles has occurred (100) so the list is being truncated to the first 100. All of the signal in the BCAL is still being recorded, but the smearing may be off by a few percent for this event. It is probably nothing to worry about. This long message will only appear once and the following line just once per event whenever this occurs. programs/Simulation/HDGeant/hitBCal.cc:371 too many particles entering BCAL! Some information will be lost. 40 events simulated 50 events simulated 60 events simulated 70 events simulated 80 events simulated 90 events simulated 100 events simulated 200 events simulated 300 events simulated HDDM Error: error writing to output hddm file. 40138 bytes of 57240 actually written. Running mcsmear ... shell-init: error retrieving current directory: getcwd: cannot access parent directories: No such file or directory Error in : getcwd() failed shell-init: error retrieving current directory: getcwd: cannot access parent directories: No such file or directory Error in : getcwd() failed shell-init: error retrieving current directory: getcwd: cannot access parent directories: No such file or directory shell-init: error retrieving current directory: getcwd: cannot access parent directories: No such file or directory *** Break *** segmentation violation Error in : getcwd() failed shell-init: error retrieving current directory: getcwd: cannot access parent directories: No such file or directory Error in : getcwd() failed shell-init: error retrieving current directory: getcwd: cannot access parent directories: No such file or directory shell-init: error retrieving current directory: getcwd: cannot access parent directories: No such file or directory =========================================================== There was a crash. This is the entire stack trace of all threads: =========================================================== #0 0x00007f2dedc7db0c in waitpid () from /lib64/libc.so.6 #1 0x00007f2dedc02092 in do_system () from /lib64/libc.so.6 #2 0x00007f2df3dd4019 in TUnixSystem::StackTrace (this=0x17c48e0) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/core/unix/src/TUnixSystem.cxx:2324 #3 0x00007f2df3dd5d1c in TUnixSystem::DispatchSignals (this=0x17c48e0, sig=kSigSegmentationViolation) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/core/unix/src/TUnixSystem.cxx:3562 #4 #5 0x00007f2dedd233c1 in __strlen_sse2_pminub () from /lib64/libc.so.6 #6 0x00007f2de57d96e1 in (anonymous namespace)::createCIImpl(std::unique_ptr >, int, char const* const*, char const*, bool) () from /group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.5/root/root-6.06.08/lib/libCling.so #7 0x00007f2de57da91b in cling::CIFactory::createCI(llvm::StringRef, int, char const* const*, char const*) () from /group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.5/root/root-6.06.08/lib/libCling.so #8 0x00007f2de57b0dc5 in cling::IncrementalParser::IncrementalParser(cling::Interpreter*, int, char const* const*, char const*) () from /group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.5/root/root-6.06.08/lib/libCling.so #9 0x00007f2de5759df8 in cling::Interpreter::Interpreter(int, char const* const*, char const*, bool) () from /group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.5/root/root-6.06.08/lib/libCling.so #10 0x00007f2de56ec165 in TCling::TCling (this=0x1870770, name=, title=) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/core/meta/src/TCling.cxx:1098 #11 0x00007f2de56ed3de in CreateInterpreter (interpLibHandle=) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/core/meta/src/TCling.cxx:578 #12 0x00007f2df3c633a8 in TROOT::InitInterpreter (this=0x7f2df40b0860 ) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/core/base/src/TROOT.cxx:1767 #13 0x00007f2df3c63726 in ROOT::Internal::GetROOT2 () at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/core/base/src/TROOT.cxx:362 #14 0x00007f2df3da0a16 in ROOT::TGenericClassInfo::GetClass (this=0x7f2df46c9080 ) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/core/meta/src/TGenericClassInfo.cxx:198 #15 0x00007f2df42b9a3a in TGClient::Class () at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/build_dir/gui/gui/G__Gui.cxx:7078 #16 0x00007f2df3d123d2 in TQObject::Emit (this=this entry=0x18622e0, signal_name=signal_name entry=0x7f2df43eb580 "RegisteredWindow(Window_t)", param=0) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/core/base/src/TQObject.cxx:607 #17 0x00007f2df42ef613 in Emit (param=, signal=0x7f2df43eb580 "RegisteredWindow(Window_t)", this=0x18622e0) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/build_dir/include/TQObject.h:127 #18 TGClient::RegisteredWindow (this=this entry=0x18622d0, w=) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/gui/gui/src/TGClient.cxx:964 #19 0x00007f2df42ef64e in TGClient::RegisterWindow (this=this entry=0x18622d0, w=w entry=0x1862b80) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/gui/gui/src/TGClient.cxx:514 #20 0x00007f2df43bd93e in TGWindow::TGWindow (this=0x1862b80, c=0x18622d0, id=0, parent=0x0) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/gui/gui/src/TGWindow.cxx:92 #21 0x00007f2df432400c in TGFrame::TGFrame (this=0x1862b80, c=, id=0, parent=) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/gui/gui/src/TGFrame.cxx:202 #22 0x00007f2df42ef855 in TGClient::TGClient (this=0x18622d0, dpyName=) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/gui/gui/src/TGClient.cxx:171 #23 0x00007f2df4281339 in TGClientInit (this=) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/build_dir/include/TObject.h:158 #24 __static_initialization_and_destruction_0 (__initialize_p=1, __priority=65535) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/gui/gui/src/TGClient.cxx:84 #25 _GLOBAL__sub_I_TGClient.cxx(void) () at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/gui/gui/src/TGClient.cxx:965 #26 0x00007f2df46db3a3 in _dl_init_internal () from /lib64/ld-linux-x86-64.so.2 #27 0x00007f2df46cd46a in _dl_start_user () from /lib64/ld-linux-x86-64.so.2 #28 0x0000000000000003 in ?? () #29 0x00007ffdbf78a6aa in ?? () #30 0x00007ffdbf78a6b2 in ?? () #31 0x00007ffdbf78a6c6 in ?? () #32 0x0000000000000000 in ?? () =========================================================== /group/halld/Software/scripts/b1pi_test/b1pi_test.sh: line 108: 21081 Segmentation fault mcsmear -PJANA:BATCH_MODE=1 hdgeant.hddm Running hd_root with danarest ... Error in : getcwd() failed Error in : getcwd() failed Error in : getcwd() failed shell-init: error retrieving current directory: getcwd: cannot access parent directories: No such file or directory Error in : getcwd() failed shell-init: error retrieving current directory: getcwd: cannot access parent directories: No such file or directory Error in : getcwd() failed shell-init: error retrieving current directory: getcwd: cannot access parent directories: No such file or directory shell-init: error retrieving current directory: getcwd: cannot access parent directories: No such file or directory *** Break *** segmentation violation Error in : getcwd() failed shell-init: error retrieving current directory: getcwd: cannot access parent directories: No such file or directory Error in : getcwd() failed shell-init: error retrieving current directory: getcwd: cannot access parent directories: No such file or directory shell-init: error retrieving current directory: getcwd: cannot access parent directories: No such file or directory =========================================================== There was a crash. This is the entire stack trace of all threads: =========================================================== #0 0x00007f8662d6db0c in waitpid () from /lib64/libc.so.6 #1 0x00007f8662cf2092 in do_system () from /lib64/libc.so.6 #2 0x00007f8668ec4019 in TUnixSystem::StackTrace (this=0x26688e0) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/core/unix/src/TUnixSystem.cxx:2324 #3 0x00007f8668ec5d1c in TUnixSystem::DispatchSignals (this=0x26688e0, sig=kSigSegmentationViolation) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/core/unix/src/TUnixSystem.cxx:3562 #4 #5 0x00007f8662e133c1 in __strlen_sse2_pminub () from /lib64/libc.so.6 #6 0x00007f865a8c96e1 in (anonymous namespace)::createCIImpl(std::unique_ptr >, int, char const* const*, char const*, bool) () from /group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.5/root/root-6.06.08/lib/libCling.so #7 0x00007f865a8ca91b in cling::CIFactory::createCI(llvm::StringRef, int, char const* const*, char const*) () from /group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.5/root/root-6.06.08/lib/libCling.so #8 0x00007f865a8a0dc5 in cling::IncrementalParser::IncrementalParser(cling::Interpreter*, int, char const* const*, char const*) () from /group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.5/root/root-6.06.08/lib/libCling.so #9 0x00007f865a849df8 in cling::Interpreter::Interpreter(int, char const* const*, char const*, bool) () from /group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.5/root/root-6.06.08/lib/libCling.so #10 0x00007f865a7dc165 in TCling::TCling (this=0x2714660, name=, title=) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/core/meta/src/TCling.cxx:1098 #11 0x00007f865a7dd3de in CreateInterpreter (interpLibHandle=) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/core/meta/src/TCling.cxx:578 #12 0x00007f8668d533a8 in TROOT::InitInterpreter (this=0x7f86691a0860 ) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/core/base/src/TROOT.cxx:1767 #13 0x00007f8668d53726 in ROOT::Internal::GetROOT2 () at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/core/base/src/TROOT.cxx:362 #14 0x00007f8668e90a16 in ROOT::TGenericClassInfo::GetClass (this=0x7f86697b9080 ) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/core/meta/src/TGenericClassInfo.cxx:198 #15 0x00007f86693a9a3a in TGClient::Class () at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/build_dir/gui/gui/G__Gui.cxx:7078 #16 0x00007f8668e023d2 in TQObject::Emit (this=this entry=0x27069d0, signal_name=signal_name entry=0x7f86694db580 "RegisteredWindow(Window_t)", param=0) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/core/base/src/TQObject.cxx:607 #17 0x00007f86693df613 in Emit (param=, signal=0x7f86694db580 "RegisteredWindow(Window_t)", this=0x27069d0) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/build_dir/include/TQObject.h:127 #18 TGClient::RegisteredWindow (this=this entry=0x27069c0, w=) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/gui/gui/src/TGClient.cxx:964 #19 0x00007f86693df64e in TGClient::RegisterWindow (this=this entry=0x27069c0, w=w entry=0x2707270) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/gui/gui/src/TGClient.cxx:514 #20 0x00007f86694ad93e in TGWindow::TGWindow (this=0x2707270, c=0x27069c0, id=0, parent=0x0) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/gui/gui/src/TGWindow.cxx:92 #21 0x00007f866941400c in TGFrame::TGFrame (this=0x2707270, c=, id=0, parent=) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/gui/gui/src/TGFrame.cxx:202 #22 0x00007f86693df855 in TGClient::TGClient (this=0x27069c0, dpyName=) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/gui/gui/src/TGClient.cxx:171 #23 0x00007f8669371339 in TGClientInit (this=) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/build_dir/include/TObject.h:158 #24 __static_initialization_and_destruction_0 (__initialize_p=1, __priority=65535) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/gui/gui/src/TGClient.cxx:84 #25 _GLOBAL__sub_I_TGClient.cxx(void) () at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/gui/gui/src/TGClient.cxx:965 #26 0x00007f86697cb3a3 in _dl_init_internal () from /lib64/ld-linux-x86-64.so.2 #27 0x00007f86697bd46a in _dl_start_user () from /lib64/ld-linux-x86-64.so.2 #28 0x0000000000000005 in ?? () #29 0x00007ffd66077682 in ?? () #30 0x00007ffd6607768a in ?? () #31 0x00007ffd6607769e in ?? () #32 0x00007ffd660776ab in ?? () #33 0x00007ffd660776be in ?? () #34 0x0000000000000000 in ?? () =========================================================== /group/halld/Software/scripts/b1pi_test/b1pi_test.sh: line 111: 21229 Segmentation fault hd_root -PJANA:BATCH_MODE=1 --nthreads=$NTHREADS -PPLUGINS=danarest hdgeant_smeared.hddm Running hd_root with b1pi_hists & monitoring_hists ... Error in : getcwd() failed Error in : getcwd() failed Error in : getcwd() failed shell-init: error retrieving current directory: getcwd: cannot access parent directories: No such file or directory Error in : getcwd() failed shell-init: error retrieving current directory: getcwd: cannot access parent directories: No such file or directory Error in : getcwd() failed shell-init: error retrieving current directory: getcwd: cannot access parent directories: No such file or directory shell-init: error retrieving current directory: getcwd: cannot access parent directories: No such file or directory *** Break *** segmentation violation Error in : getcwd() failed shell-init: error retrieving current directory: getcwd: cannot access parent directories: No such file or directory Error in : getcwd() failed shell-init: error retrieving current directory: getcwd: cannot access parent directories: No such file or directory shell-init: error retrieving current directory: getcwd: cannot access parent directories: No such file or directory =========================================================== There was a crash. This is the entire stack trace of all threads: =========================================================== #0 0x00007f928aaceb0c in waitpid () from /lib64/libc.so.6 #1 0x00007f928aa53092 in do_system () from /lib64/libc.so.6 #2 0x00007f9290c25019 in TUnixSystem::StackTrace (this=0x177f8e0) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/core/unix/src/TUnixSystem.cxx:2324 #3 0x00007f9290c26d1c in TUnixSystem::DispatchSignals (this=0x177f8e0, sig=kSigSegmentationViolation) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/core/unix/src/TUnixSystem.cxx:3562 #4 #5 0x00007f928ab743c1 in __strlen_sse2_pminub () from /lib64/libc.so.6 #6 0x00007f928262a6e1 in (anonymous namespace)::createCIImpl(std::unique_ptr >, int, char const* const*, char const*, bool) () from /group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.5/root/root-6.06.08/lib/libCling.so #7 0x00007f928262b91b in cling::CIFactory::createCI(llvm::StringRef, int, char const* const*, char const*) () from /group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.5/root/root-6.06.08/lib/libCling.so #8 0x00007f9282601dc5 in cling::IncrementalParser::IncrementalParser(cling::Interpreter*, int, char const* const*, char const*) () from /group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.5/root/root-6.06.08/lib/libCling.so #9 0x00007f92825aadf8 in cling::Interpreter::Interpreter(int, char const* const*, char const*, bool) () from /group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.5/root/root-6.06.08/lib/libCling.so #10 0x00007f928253d165 in TCling::TCling (this=0x182b660, name=, title=) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/core/meta/src/TCling.cxx:1098 #11 0x00007f928253e3de in CreateInterpreter (interpLibHandle=) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/core/meta/src/TCling.cxx:578 #12 0x00007f9290ab43a8 in TROOT::InitInterpreter (this=0x7f9290f01860 ) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/core/base/src/TROOT.cxx:1767 #13 0x00007f9290ab4726 in ROOT::Internal::GetROOT2 () at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/core/base/src/TROOT.cxx:362 #14 0x00007f9290bf1a16 in ROOT::TGenericClassInfo::GetClass (this=0x7f929151a080 ) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/core/meta/src/TGenericClassInfo.cxx:198 #15 0x00007f929110aa3a in TGClient::Class () at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/build_dir/gui/gui/G__Gui.cxx:7078 #16 0x00007f9290b633d2 in TQObject::Emit (this=this entry=0x181d9d0, signal_name=signal_name entry=0x7f929123c580 "RegisteredWindow(Window_t)", param=0) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/core/base/src/TQObject.cxx:607 #17 0x00007f9291140613 in Emit (param=, signal=0x7f929123c580 "RegisteredWindow(Window_t)", this=0x181d9d0) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/build_dir/include/TQObject.h:127 #18 TGClient::RegisteredWindow (this=this entry=0x181d9c0, w=) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/gui/gui/src/TGClient.cxx:964 #19 0x00007f929114064e in TGClient::RegisterWindow (this=this entry=0x181d9c0, w=w entry=0x181e270) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/gui/gui/src/TGClient.cxx:514 #20 0x00007f929120e93e in TGWindow::TGWindow (this=0x181e270, c=0x181d9c0, id=0, parent=0x0) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/gui/gui/src/TGWindow.cxx:92 #21 0x00007f929117500c in TGFrame::TGFrame (this=0x181e270, c=, id=0, parent=) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/gui/gui/src/TGFrame.cxx:202 #22 0x00007f9291140855 in TGClient::TGClient (this=0x181d9c0, dpyName=) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/gui/gui/src/TGClient.cxx:171 #23 0x00007f92910d2339 in TGClientInit (this=) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/build_dir/include/TObject.h:158 #24 __static_initialization_and_destruction_0 (__initialize_p=1, __priority=65535) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/gui/gui/src/TGClient.cxx:84 #25 _GLOBAL__sub_I_TGClient.cxx(void) () at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/gui/gui/src/TGClient.cxx:965 #26 0x00007f929152c3a3 in _dl_init_internal () from /lib64/ld-linux-x86-64.so.2 #27 0x00007f929151e46a in _dl_start_user () from /lib64/ld-linux-x86-64.so.2 #28 0x0000000000000005 in ?? () #29 0x00007ffd168c5675 in ?? () #30 0x00007ffd168c567d in ?? () #31 0x00007ffd168c5691 in ?? () #32 0x00007ffd168c569e in ?? () #33 0x00007ffd168c56c4 in ?? () #34 0x0000000000000000 in ?? () =========================================================== Create plots /group/halld/Software/scripts/b1pi_test/b1pi_test.sh: line 114: 21383 Segmentation fault hd_root -PJANA:BATCH_MODE=1 --nthreads=$NTHREADS -PPLUGINS=b1pi_hists,monitoring_hists dana_rest.hddm Error in : getcwd() failed Error in : getcwd() failed Error in : getcwd() failed shell-init: error retrieving current directory: getcwd: cannot access parent directories: No such file or directory Error in : getcwd() failed shell-init: error retrieving current directory: getcwd: cannot access parent directories: No such file or directory Error in : getcwd() failed shell-init: error retrieving current directory: getcwd: cannot access parent directories: No such file or directory shell-init: error retrieving current directory: getcwd: cannot access parent directories: No such file or directory *** Break *** segmentation violation Error in : getcwd() failed shell-init: error retrieving current directory: getcwd: cannot access parent directories: No such file or directory Error in : getcwd() failed shell-init: error retrieving current directory: getcwd: cannot access parent directories: No such file or directory shell-init: error retrieving current directory: getcwd: cannot access parent directories: No such file or directory =========================================================== There was a crash. This is the entire stack trace of all threads: =========================================================== #0 0x00007f689237db0c in waitpid () from /lib64/libc.so.6 #1 0x00007f6892302092 in do_system () from /lib64/libc.so.6 #2 0x00007f68935a1019 in TUnixSystem::StackTrace (this=0x22f98e0) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/core/unix/src/TUnixSystem.cxx:2324 #3 0x00007f68935a2d1c in TUnixSystem::DispatchSignals (this=0x22f98e0, sig=kSigSegmentationViolation) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/core/unix/src/TUnixSystem.cxx:3562 #4 #5 0x00007f68924233c1 in __strlen_sse2_pminub () from /lib64/libc.so.6 #6 0x00007f688f0ec6e1 in (anonymous namespace)::createCIImpl(std::unique_ptr >, int, char const* const*, char const*, bool) () from /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/lib/libCling.so #7 0x00007f688f0ed91b in cling::CIFactory::createCI(llvm::StringRef, int, char const* const*, char const*) () from /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/lib/libCling.so #8 0x00007f688f0c3dc5 in cling::IncrementalParser::IncrementalParser(cling::Interpreter*, int, char const* const*, char const*) () from /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/lib/libCling.so #9 0x00007f688f06cdf8 in cling::Interpreter::Interpreter(int, char const* const*, char const*, bool) () from /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/lib/libCling.so #10 0x00007f688efff165 in TCling::TCling (this=0x235b910, name=, title=) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/core/meta/src/TCling.cxx:1098 #11 0x00007f688f0003de in CreateInterpreter (interpLibHandle=) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/core/meta/src/TCling.cxx:578 #12 0x00007f68934303a8 in TROOT::InitInterpreter (this=0x7f689387d860 ) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/core/base/src/TROOT.cxx:1767 #13 0x00007f6893430726 in ROOT::Internal::GetROOT2 () at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/core/base/src/TROOT.cxx:362 #14 0x00007f68934a29e5 in TApplication::TApplication (this=0x2349530, appClassName=0x4013a0 "Rint", argc=0x7ffe7c12861c, argv=0x7ffe7c128718, numOptions=0) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/core/base/src/TApplication.cxx:144 #15 0x00007f68930cede1 in TRint::TRint (this=0x2349530, appClassName=, argc=, argv=, options=, numOptions=, noLogo=false) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/core/rint/src/TRint.cxx:143 #16 0x000000000040108e in main (argc=5, argv=0x7ffe7c128718) at /u/group/halld/Software/builds/Linux_RHEL7-x86_64-gcc4.8.3/root/root-6.06.08/main/src/rmain.cxx:27 =========================================================== #count events /group/halld/Software/scripts/b1pi_test/b1pi_cron_one.sh: line 19: hddm_counter.pl: command not found #count b1_pi.hddm /group/halld/Software/scripts/b1pi_test/b1pi_cron_one.sh: line 20: hddm_counter.pl: command not found #count hdgeant.hddm /group/halld/Software/scripts/b1pi_test/b1pi_cron_one.sh: line 21: hddm_counter.pl: command not found #count hdgeant_smeared.hddm /group/halld/Software/scripts/b1pi_test/b1pi_cron_one.sh: line 22: hddm_counter.pl: command not found #count dana_rest.hddm /group/halld/Software/scripts/b1pi_test/b1pi_cron_one.sh: line 23: hddm_counter.pl: command not found #count dana_rest_b1pi.hddm mkdir: created directory '/group/halld/www/halldweb/html/b1pi/2016-09-22/Linux_RHEL7-x86_64-gcc4.8.5' cp: cannot stat '*.pdf': Stale file handle cp: cannot stat '*.gif': Stale file handle cp: cannot stat '*.html': Stale file handle