Pseudo-terminal will not be allocated because stdin is not a terminal. mkdir: created directory `/u/scratch/gluex/b1pi/2015-12-10/Linux_CentOS6-x86_64-gcc4.4.7' info: number of threads not defined, using default value 1 info: vertex parameters not defined, using default values 0 0 50 80 NEVENTS = 150000 VERTEX = 0 0 50 80 NTHREADS = 1 B1PI_TEST_DIR = /group/halld/Software/scripts/b1pi_test Copying script files and macros ... `/group/halld/Software/scripts/b1pi_test/b1pi_cron_one.sh' -> `./b1pi_cron_one.sh' `/group/halld/Software/scripts/b1pi_test/b1pi_cron.sh' -> `./b1pi_cron.sh' `/group/halld/Software/scripts/b1pi_test/b1_pi.input' -> `./b1_pi.input' `/group/halld/Software/scripts/b1pi_test/b1pi_message.sh' -> `./b1pi_message.sh' `/group/halld/Software/scripts/b1pi_test/b1pi_test.sh' -> `./b1pi_test.sh' `/group/halld/Software/scripts/b1pi_test/index.html' -> `./index.html' cp: omitting directory `/group/halld/Software/scripts/b1pi_test/macros' `/group/halld/Software/scripts/b1pi_test/my_b1pi_test.sh' -> `./my_b1pi_test.sh' `/group/halld/Software/scripts/b1pi_test/README' -> `./README' `/group/halld/Software/scripts/b1pi_test/macros/anal1.C' -> `./anal1.C' `/group/halld/Software/scripts/b1pi_test/macros/b1_pi.C' -> `./b1_pi.C' `/group/halld/Software/scripts/b1pi_test/macros/b1pi_gen.C' -> `./b1pi_gen.C' `/group/halld/Software/scripts/b1pi_test/macros/b1pi_gen.h' -> `./b1pi_gen.h' `/group/halld/Software/scripts/b1pi_test/macros/b1_pi.h' -> `./b1_pi.h' `/group/halld/Software/scripts/b1pi_test/macros/b1pi_rec.C' -> `./b1pi_rec.C' `/group/halld/Software/scripts/b1pi_test/macros/b1pi_rec.h' -> `./b1pi_rec.h' `/group/halld/Software/scripts/b1pi_test/macros/fit_voigt.C' -> `./fit_voigt.C' `/group/halld/Software/scripts/b1pi_test/macros/makeallplots.C' -> `./makeallplots.C' `/group/halld/Software/scripts/b1pi_test/macros/mass_X.C' -> `./mass_X.C' `/group/halld/Software/scripts/b1pi_test/macros/mk_pics.C' -> `./mk_pics.C' `/group/halld/Software/scripts/b1pi_test/macros/momentum.C' -> `./momentum.C' `/group/halld/Software/scripts/b1pi_test/macros/StandardLabels.C' -> `./StandardLabels.C' `/group/halld/Software/scripts/b1pi_test/macros/theta.C' -> `./theta.C' Running genr8 ... Using runNo: 1501 Maximum number of events: 150000 Opening file b1_pi.ascii for output. Reading: beamp.x beamp.y beamp.z beamMass Found: 0.000000 0.000000 9.000000 0.000000 Reading: targetp.x targetp.y targetp.z targetMass Found: 0.000000 0.000000 0.000000 0.938000 Reading: t-channelSlope Found: 5.000000 Reading: number of particles need to describe the decay Found: 12 Reading: part# chld1# chld2# prnt# Id nchld mass width chrg flag Found: 0 -1 -1 -1 14 0 0.938000 0.000000 1 11 Found: 1 2 3 -1 0 2 2.000000 0.100000 1 0 Found: 2 4 5 1 0 2 1.235000 0.142000 1 0 Found: 3 4 5 1 9 0 0.140000 0.000000 -1 11 Found: 4 6 7 2 0 2 0.783000 0.009000 0 0 Found: 5 6 7 2 8 0 0.140000 0.000000 1 11 Found: 6 8 9 4 0 2 0.776000 0.150000 0 0 Found: 7 10 11 4 7 2 0.135000 0.000000 0 0 Found: 8 10 11 6 8 0 0.140000 0.000000 1 11 Found: 9 10 11 6 9 0 0.140000 0.000000 -1 11 Found: 10 10 11 7 1 0 0.000000 0.000000 0 11 Found: 11 10 11 7 1 0 0.000000 0.000000 0 11 Found EOI---- Input File appears Fine. Calculating Lorentz Factor: 9000 Calculating Lorentz Factor: 8000 Calculating Lorentz Factor: 7000 Calculating Lorentz Factor: 6000 Calculating Lorentz Factor: 5000 Calculating Lorentz Factor: 4000 Calculating Lorentz Factor: 3000 Calculating Lorentz Factor: 2000 Calculating Lorentz Factor: 1000 Calculating Lorentz Factor: 100 Calculating Lorentz Factor: 90 Calculating Lorentz Factor: 80 Calculating Lorentz Factor: 70 Calculating Lorentz Factor: 60 Calculating Lorentz Factor: 50 Calculating Lorentz Factor: 40 Calculating Lorentz Factor: 30 Calculating Lorentz Factor: 20 Calculating Lorentz Factor: 10 Calculating Lorentz Factor: 0 Events generated: 100 Events accepted: 50 Events generated: 200 Events accepted: 91 Events generated: 300 Events accepted: 125 Events generated: 400 Events accepted: 174 Events generated: 500 Events accepted: 210 Events generated: 600 Events accepted: 248 Events generated: 700 Events accepted: 296 Events generated: 800 Events accepted: 339 Events generated: 900 Events accepted: 383 Events generated: 1000 Events accepted: 430 Events generated: 10000 Events accepted: 4423 Events generated: 20000 Events accepted: 8874 Events generated: 30000 Events accepted: 13271 Events generated: 40000 Events accepted: 17643 Events generated: 50000 Events accepted: 22146 Events generated: 60000 Events accepted: 26639 Events generated: 70000 Events accepted: 31112 Events generated: 80000 Events accepted: 35605 Events generated: 90000 Events accepted: 40018 Events generated: 100000 Events accepted: 44445 Events generated: 110000 Events accepted: 48850 Events generated: 120000 Events accepted: 53315 Events generated: 130000 Events accepted: 57769 Events generated: 140000 Events accepted: 62293 Events generated: 150000 Events accepted: 66745 Events generated: 160000 Events accepted: 71259 Events generated: 170000 Events accepted: 75713 Events generated: 180000 Events accepted: 80116 Events generated: 190000 Events accepted: 84519 Events generated: 200000 Events accepted: 88957 Events generated: 210000 Events accepted: 93323 Events generated: 220000 Events accepted: 97751 Events generated: 230000 Events accepted: 102182 Events generated: 240000 Events accepted: 106620 Events generated: 250000 Events accepted: 111149 Events generated: 260000 Events accepted: 115534 Events generated: 270000 Events accepted: 119977 Events generated: 280000 Events accepted: 124458 Events generated: 290000 Events accepted: 128884 Events generated: 300000 Events accepted: 133304 Events generated: 310000 Events accepted: 137836 Events generated: 320000 Events accepted: 142360 Events generated: 330000 Events accepted: 146648 Max Lorentz Factor:0.001355 Events generated:337637 Events accepted:150000 Setting random number seed to: 1449772363 Converting generated events to HDDM ... Wrote event 1000 Wrote event 2000 Wrote event 3000 Wrote event 4000 Wrote event 5000 Wrote event 6000 Wrote event 7000 Wrote event 8000 Wrote event 9000 Wrote event 10000 Wrote event 11000 Wrote event 12000 Wrote event 13000 Wrote event 14000 Wrote event 15000 Wrote event 16000 Wrote event 17000 Wrote event 18000 Wrote event 19000 Wrote event 20000 Wrote event 21000 Wrote event 22000 Wrote event 23000 Wrote event 24000 Wrote event 25000 Wrote event 26000 Wrote event 27000 Wrote event 28000 Wrote event 29000 Wrote event 30000 Wrote event 31000 Wrote event 32000 Wrote event 33000 Wrote event 34000 Wrote event 35000 Wrote event 36000 Wrote event 37000 Wrote event 38000 Wrote event 39000 Wrote event 40000 Wrote event 41000 Wrote event 42000 Wrote event 43000 Wrote event 44000 Wrote event 45000 Wrote event 46000 Wrote event 47000 Wrote event 48000 Wrote event 49000 Wrote event 50000 Wrote event 51000 Wrote event 52000 Wrote event 53000 Wrote event 54000 Wrote event 55000 Wrote event 56000 Wrote event 57000 Wrote event 58000 Wrote event 59000 Wrote event 60000 Wrote event 61000 Wrote event 62000 Wrote event 63000 Wrote event 64000 Wrote event 65000 Wrote event 66000 Wrote event 67000 Wrote event 68000 Wrote event 69000 Wrote event 70000 Wrote event 71000 Wrote event 72000 Wrote event 73000 Wrote event 74000 Wrote event 75000 Wrote event 76000 Wrote event 77000 Wrote event 78000 Wrote event 79000 Wrote event 80000 Wrote event 81000 Wrote event 82000 Wrote event 83000 Wrote event 84000 Wrote event 85000 Wrote event 86000 Wrote event 87000 Wrote event 88000 Wrote event 89000 Wrote event 90000 Wrote event 91000 Wrote event 92000 Wrote event 93000 Wrote event 94000 Wrote event 95000 Wrote event 96000 Wrote event 97000 Wrote event 98000 Wrote event 99000 Wrote event 100000 Wrote event 101000 Wrote event 102000 Wrote event 103000 Wrote event 104000 Wrote event 105000 Wrote event 106000 Wrote event 107000 Wrote event 108000 Wrote event 109000 Wrote event 110000 Wrote event 111000 Wrote event 112000 Wrote event 113000 Wrote event 114000 Wrote event 115000 Wrote event 116000 Wrote event 117000 Wrote event 118000 Wrote event 119000 Wrote event 120000 Wrote event 121000 Wrote event 122000 Wrote event 123000 Wrote event 124000 Wrote event 125000 Wrote event 126000 Wrote event 127000 Wrote event 128000 Wrote event 129000 Wrote event 130000 Wrote event 131000 Wrote event 132000 Wrote event 133000 Wrote event 134000 Wrote event 135000 Wrote event 136000 Wrote event 137000 Wrote event 138000 Wrote event 139000 Wrote event 140000 Wrote event 141000 Wrote event 142000 Wrote event 143000 Wrote event 144000 Wrote event 145000 Wrote event 146000 Wrote event 147000 Wrote event 148000 Wrote event 149000 Wrote event 150000 Wrote 150000 events to b1_pi.hddm Creating control.in file ... Running hdgeant ... JANA >>Created JCalibration object of type: JCalibrationCCDB JANA >>Generated via: JCalibration using CCDB for MySQL and SQLite databases JANA >>Run:1501 JANA >>URL: mysql://ccdb_user@hallddb.jlab.org/ccdb JANA >>context: variation=mc JANA >>WARNING: Unable to open "/tmp/gluex/resources/info.xml" (not necessarily a problem) JANA >>Reading Magnetic field map from Magnets/Solenoid/solenoid_1200A_poisson_20140520 ... Nx=251 Ny=1 Nz=701 ) at 0x4fac090 Reading fine-mesh B-field data from /tmp/gluex/resources/Magnets/Solenoid/finemeshes/solenoid_1200A_poisson_20140520.evio rmin: 0 rmax: 88.5 dr: 0.1 zmin: 0 zmax: 600 dz: 0.1 Number of points in z = 6000 Number of points in r = 885 JANA >>175951 entries found (Creating DGeometry: JANA >> Run requested:1501 found:1501 JANA >> Run validity range: 1501-1501 JANA >> URL="xmlfile:///u/scratch/gluex/nightly/2015-12-10/Linux_CentOS6-x86_64-gcc4.4.7/hdds/main_HDDS.xml" context="default" JANA >> Type="JGeometryXML" JANA >>Found 18 material maps in calib. DB for run 1501 JANA >>Read in 18 material maps containing 62173 grid points total JANA >> JANA >>Reading Pair Spectrometer Magnetic field map from Magnets/PairSpectrometer/PS_1.8T_20150513_test ... Nx=40 Ny=1 Nz=121 ) at 0x9058e80 TAGGER: ALL parameters loaded from Data Base START: ALL parameters loaded from Data Base CDC: ALL parameters loaded from Data Base BCAL/bcal_parms: ALL parameters loaded from Data Base BCAL/mc_parms: ALL parameters loaded from Data Base FDC: ALL parameters loaded from Data Base TOF: ALL parameters loaded from Data Base FCAL: ALL parameters loaded from Data Base WARNING: The BCAL records information about certain particles entering it so that information can be used later in mcsmear to properly smear the signals. For this event, more than the maximum number of incident particles has occurred (100) so the list is being truncated to the first 100. All of the signal in the BCAL is still being recorded, but the smearing may be off by a few percent for this event. It is probably nothing to worry about. This long message will only appear once and the following line just once per event whenever this occurs. programs/Simulation/HDGeant/hitBCal.cc:371 too many particles entering BCAL! Some information will be lost. MZSTOR. ZEBRA table base TAB(0) in /MZCC/ at adr 18251455 1167EBF HEX MZSTOR. Initialize Store 0 in /GCBANK/ with Store/Table at absolute adrs 12687429 18251455 HEX C19845 1167EBF HEX FFAB17AA 0 relative adrs -5564502 0 with 1 Str. in 2 Links in 5300 Low words in 4999970 words. This store has a fence of 16 words. MZLOGL. Set Log Level 0 for store 0 MZSTOR. Initialize Store 1 in /PAWC/ with Store/Table at absolute adrs 7687417 12687008 HEX 754CF9 C196A0 HEX FF5ECC5E FFAB17E1 relative adrs -10564514 -5564447 with 1 Str. in 1 Links in 5001 Low words in 4999990 words. This store has a fence of 5 words. MZLINK. Initialize Link Area /HCBOOK/ for Store 1 NL/NS= 49 4 MZDIV. Initialize Division HIGZ in Store 1 NW/NWMAX= 10005000000, MODE/KIND= 0 3 Division 20 initialized. MZLINK. Initialize Link Area /HILINK/ for Store 1 NL/NS= 42 2 Version 1.29/04 of HIGZ started 1***** GEANT Version 3.21/14 Released on 19032002 0***** Correction Cradle Version 0.1400 MODE VERSION 1.00 : MZDIV. Initialize Division Constant in Store 0 NW/NWMAX= 20004000000, MODE/KIND= 1 2 Division 20 initialized. MZLINK. Initialize Link Area /GCLINK/ for Store 0 NL/NS= 20 20 MZLINK. Initialize Link Area /GCSLNK/ for Store 0 NL/NS= 100 100 run number 1501 0 RZOPEN. record length: 65536 > maximum safe value (8191 words). RZOPEN. Automatic record length determination will not work with this file. RZOPEN. You may have problems transferring your file to other systems or writing it to tape. RZMAKE. Unit 1011 Initializing with LREC= 65536, OPT= X?C MZLINK. Initialize Link Area RZCL for Store 0 NL/NS= 11 0 MZLINK. Initialize Link Area /GCHVIR/ for Store 0 NL/NS= 4 1 MZLINK. Initialize Link Area /GCDINA/ for Store 0 NL/NS= 4 4 1************************************************************ * * * G E A N T Version 3.2114 DATE/TIME 151210/0800 * * * * R U N 1501 * * * ************************************************************ * * * Data structure Date Time GVERSN ZVERSN * * -------------- ---- ---- ------ ------ * * * * INIT 151210 0800 3.2114 3.79 * * * * KINE 151210 0800 3.2114 3.79 * * * * HITS 151210 0800 3.2114 3.79 * * * * DIGI 151210 0800 3.2114 3.79 * * * * Random number seeds: 1315342834 425995190 * * -------------------- * * * *----------------------------------------------------------* * * * Standard TPAR for this run are * * ------------------------------ * * * * CUTGAM= 1.00 MeV CUTELE= 1.00 MeV CUTNEU= 10.00 MeV * * CUTHAD= 10.00 MeV CUTMUO= 10.00 MeV * * BCUTE = 1.00 MeV BCUTM = 1.00 MeV * * DCUTE = 1.00 MeV DCUTM = 1.00 MeV PPCUTM= 10.00 MeV * * IPAIR = 1. ICOMP = 1. IPHOT = 1. * * IPFIS = 0. IDRAY = 1. IANNI = 1. * * IBREM = 1. IHADR = 1. IMUNU = 1. * * IDCAY = 1. ILOSS = 1. IMULS = 1. * * IRAYL = 0. ILABS = 0. ISYNC = 0. * * ISTRA = 0. * * * * * ************************************************************ RZMAKE. Unit 3 Initializing with LREC= 1024, OPT= ON X RZMAKE. new RZ format selected. This file will not be readable with versions of RZ prior to release 94B *** GROUT *** Data structure DRAW version 1 saved to disk *** GROUT *** Data structure MATE version 1 saved to disk *** GROUT *** Data structure PART version 1 saved to disk *** GROUT *** Data structure ROTM version 1 saved to disk *** GROUT *** Data structure RUNG version 1 saved to disk *** GROUT *** Data structure SETS was not found *** GROUT *** Data structure TMED version 1 saved to disk *** GROUT *** Data structure VOLU version 1 saved to disk *** GROUT *** Data structure SCAN was not found RZEND. called for LUN3 0 events simulated settofg: beam_bucket_period_ns set to 2.0040081 10 events simulated 20 events simulated 30 events simulated 40 events simulated 50 events simulated 60 events simulated 70 events simulated 80 events simulated 90 events simulated 100 events simulated Warning in savehits: unsaved hit information found from sensitive volume FDA1, hit discarded. 200 events simulated 300 events simulated 400 events simulated 500 events simulated 600 events simulated 700 events simulated 800 events simulated 900 events simulated 1000 events simulated 2000 events simulated 3000 events simulated 4000 events simulated 5000 events simulated 6000 events simulated 7000 events simulated 8000 events simulated 9000 events simulated 10000 events simulated 20000 events simulated *** GTRACK *** More than 100000 steps, tracking abandoned! IEVENT= 20589 IDEVT= 20589 Random Seeds = 47919058 346062154 Track 54 stack 8 NTMULT 181 NEUTRINO Time of flight 1461.970 ns Warning in savehits: unsaved hit information found from sensitive volume FDA2, hit discarded. Warning in savehits: unsaved hit information found from sensitive volume FDA4, hit discarded. 30000 events simulated *** GTRACK *** More than 100000 steps, tracking abandoned! IEVENT= 34270 IDEVT= 34270 Random Seeds = 1676106241 1584896924 Track 262 stack 13 NTMULT 523 NEUTRINO Time of flight 12.126 ns *** GTRACK *** More than 100000 steps, tracking abandoned! IEVENT= 35024 IDEVT= 35024 Random Seeds = 1569007907 776588283 Track 3 stack 3 NTMULT 841 GAMMA Time of flight 3.503 ns *** GTRACK *** More than 100000 steps, tracking abandoned! IEVENT= 39229 IDEVT= 39229 Random Seeds = 1789254948 1560247491 Track 169 stack 26 NTMULT 747 NEUTRINO Time of flight 31.166 ns Warning in savehits: unsaved hit information found from sensitive volume FDA2, hit discarded. 40000 events simulated *** GTRACK *** More than 100000 steps, tracking abandoned! IEVENT= 44708 IDEVT= 44708 Random Seeds = 1941860151 1228195486 ***** Normal exit from Hall D GEANT ***** Track 208 stack 5 NTMULT 958 NEUTRINO Time of flight 1106.351 ns 50000 events simulated Warning in savehits: unsaved hit information found from sensitive volume FDA3, hit discarded. Warning in savehits: unsaved hit information found from sensitive volume FDA3, hit discarded. Warning in savehits: unsaved hit information found from sensitive volume FDA2, hit discarded. Warning in savehits: unsaved hit information found from sensitive volume FDA2, hit discarded. Warning in savehits: unsaved hit information found from sensitive volume FDA2, hit discarded. Warning in savehits: unsaved hit information found from sensitive volume FDA4, hit discarded. 60000 events simulated Warning in savehits: unsaved hit information found from sensitive volume FDA1, hit discarded. Warning in savehits: unsaved hit information found from sensitive volume FDA4, hit discarded. Warning in savehits: unsaved hit information found from sensitive volume FDA3, hit discarded. Warning in savehits: unsaved hit information found from sensitive volume FDA4, hit discarded. 70000 events simulated Warning in savehits: unsaved hit information found from sensitive volume FDA1, hit discarded. 80000 events simulated Warning in savehits: unsaved hit information found from sensitive volume FDA2, hit discarded. Warning in savehits: unsaved hit information found from sensitive volume FDA1, hit discarded. 90000 events simulated Warning in savehits: unsaved hit information found from sensitive volume FDA4, hit discarded. Warning in savehits: unsaved hit information found from sensitive volume FDA3, hit discarded. 100000 events simulated Warning in savehits: unsaved hit information found from sensitive volume FDA4, hit discarded. *** GTRACK *** More than 100000 steps, tracking abandoned! IEVENT= 102291 IDEVT= 102291 Random Seeds = 1359709980 1845980799 Track 58 stack 18 NTMULT 511 NEUTRINO Time of flight 2122.553 ns Warning in savehits: unsaved hit information found from sensitive volume FDA4, hit discarded. Warning in savehits: unsaved hit information found from sensitive volume FDA4, hit discarded. Warning in savehits: unsaved hit information found from sensitive volume FDA2, hit discarded. Warning in savehits: unsaved hit information found from sensitive volume FDA2, hit discarded. Warning in savehits: unsaved hit information found from sensitive volume FDA3, hit discarded. Warning in savehits: unsaved hit information found from sensitive volume FDA1, hit discarded. Warning in savehits: unsaved hit information found from sensitive volume FDA2, hit discarded. 1 **** NUMBER OF EVENTS PROCESSED = 150000 **** RANDOM NUMBER GENERATOR AFTER LAST COMPLETE EVENT 1088756060 1573734604 **** TIME TO PROCESS ONE EVENT IS = 0.0909 SECONDS MZEND. Usage statistics for 2 dynamic stores. Map of store 0 /GCBANK/ ------------------------ Division Number of times Kind Max-size Garb-coll. Mode Position used allowed Wiped user auto Pushd Redcd 1 QDIV1 0 1 5203 0 4999968 0 0 0 0 0 2 QDIV2 1 1 4081504 134293 4999968 150000 0 0 0 0 19 system 1 8 4155679 68180 4999968 0 0 0 0 0 20 Constant 1 2 4999968 803918 4000000 0 0 128 143 0 Map of store 1 /PAWC/ ------------------------ Division Number of times Kind Max-size Garb-coll. Mode Position used allowed Wiped user auto Pushd Redcd 1 QDIV1 0 1 2 0 4999585 0 0 0 0 0 2 QDIV2 1 1 4998185 1100 4999585 0 0 0 0 0 19 system 1 8 4998585 111 4999585 0 0 0 0 0 20 HIGZ 0 4 4998585 0 5000000 0 0 0 0 0 RZEND. called for RZFILE Running mcsmear ... BCAL values will be smeared BCAL values will be added JANA >> Enabling z compression of output HDDM file stream (default) JANA >> Enabling CRC data integrity check in output HDDM file stream JANA >>Opening source "hdgeant.hddm" of type: HDDM JANA >>Launching threads . JANA >>Installing special signal handler for mcsmear... JANA >>Created JCalibration object of type: JCalibrationCCDB JANA >>Generated via: JCalibration using CCDB for MySQL and SQLite databases JANA >>Run:1501 JANA >>URL: mysql://ccdb_user@hallddb.jlab.org/ccdb JANA >>context: variation=mc JANA >>Creating DGeometry: JANA >> Run requested:1501 found:1501 JANA >> Run validity range: 1501-1501 JANA >> URL="xmlfile:///u/scratch/gluex/nightly/2015-12-10/Linux_CentOS6-x86_64-gcc4.4.7/hdds/main_HDDS.xml" context="default" JANA >> Type="JGeometryXML" JANA >>Found 18 material maps in calib. DB for run 1501 JANA >>Read in 18 material maps containing 62173 grid points total get TOF/tof_parms parameters from calibDB get BCAL/bcal_parms parameters from calibDB get BCAL/attenuation_parameters from calibDB get BCAL/effective_velocities parameters from calibDB get BCAL/digi_scales parameters from calibDB get BCAL/base_time_offset parameters from calibDB get FCAL/fcal_parms parameters from calibDB get CDC/cdc_parms parameters from calibDB get FDC/fdc_parms parameters from calibDB get START_COUNTER/start_parms parameters from calibDB JANA >> JANA >> --- Configuration Parameters -- JANA >> JANA:BATCH_MODE = 1  JANA >> THREAD_TIMEOUT = 30 seconds JANA >> ------------------------------- JANA ERROR>> Thread 0 (7fcb4181b700) hasn't responded in 31 seconds. (run:event=1501:13147) Cancelling ... JANA ERROR>> Thread 0 (7fcb4181b700) hasn't responded in 31.5 seconds. (run:event=1501:13147) Cancelling ... JANA ERROR>> Thread 0 (7fcb4181b700) hasn't responded in 32 seconds. (run:event=1501:13147) Cancelling ... JANA ERROR>> Thread 0 (7fcb4181b700) hasn't responded in 32.5 seconds. (run:event=1501:13147) Cancelling ... JANA ERROR>> Thread 0 (7fcb4181b700) hasn't responded in 33 seconds. (run:event=1501:13147) Cancelling ... JANA ERROR>> Thread 0 (7fcb4181b700) hasn't responded in 33.5 seconds. (run:event=1501:13147) Cancelling ... JANA ERROR>> Thread 0 (7fcb4181b700) hasn't responded in 34 seconds. (run:event=1501:13147) Cancelling ... JANA ERROR>> Thread 0 (7fcb4181b700) hasn't responded in 34.5 seconds. (run:event=1501:13147) Cancelling ... JANA ERROR>> Thread 0 (7fcb4181b700) hasn't responded in 35 seconds. (run:event=1501:13147) Cancelling ... JANA ERROR>> Thread 0 (7fcb4181b700) hasn't responded in 35.5 seconds. (run:event=1501:13147) Cancelling ... JANA ERROR>> Thread 0 (7fcb4181b700) hasn't responded in 36 seconds. (run:event=1501:13147) Cancelling ... JANA ERROR>> Thread 0 (7fcb4181b700) hasn't responded in 36.5 seconds. (run:event=1501:13147) Cancelling ... JANA ERROR>> Thread 0 (7fcb4181b700) hasn't responded in 37 seconds. (run:event=1501:13147) Cancelling ... JANA ERROR>> Thread 0 (7fcb4181b700) hasn't responded in 37.5 seconds. (run:event=1501:13147) Cancelling ... JANA ERROR>> Thread 0 (7fcb4181b700) hasn't responded in 38 seconds. (run:event=1501:13147) Cancelling ... JANA ERROR>> Thread 0 (7fcb4181b700) hasn't responded in 38.5 seconds. (run:event=1501:13147) Cancelling ... JANA ERROR>> Thread 0 (7fcb4181b700) hasn't responded in 39 seconds. (run:event=1501:13147) Cancelling ... JANA ERROR>> Thread 0 (7fcb4181b700) hasn't responded in 39.5 seconds. (run:event=1501:13147) Cancelling ... JANA ERROR>> Thread 0 (7fcb4181b700) hasn't responded in 40 seconds. (run:event=1501:13147) Cancelling ... JANA ERROR>> Thread 0 (7fcb4181b700) hasn't responded in 40.5 seconds. (run:event=1501:13147) Cancelling ... JANA ERROR>> Thread 0 (7fcb4181b700) hasn't responded in 41 seconds. (run:event=1501:13147) Cancelling ... JANA ERROR>> Thread 0 (7fcb4181b700) hasn't responded in 41.5 seconds. (run:event=1501:13147) Cancelling ... JANA ERROR>> Thread 0 (7fcb4181b700) hasn't responded in 42 seconds. (run:event=1501:13147) Cancelling ... JANA ERROR>> Thread 0 (7fcb4181b700) hasn't responded in 42.5 seconds. (run:event=1501:13147) Cancelling ... JANA ERROR>> Thread 0 (7fcb4181b700) hasn't responded in 43 seconds. (run:event=1501:13147) Cancelling ... JANA ERROR>> Thread 0 (7fcb4181b700) hasn't responded in 43.5 seconds. (run:event=1501:13147) Cancelling ... JANA ERROR>> Thread 0 (7fcb4181b700) hasn't responded in 44 seconds. (run:event=1501:13147) Cancelling ... JANA ERROR>> Thread 0 (7fcb4181b700) hasn't responded in 44.5 seconds. (run:event=1501:13147) Cancelling ... JANA ERROR>> Thread 0 (7fcb4181b700) hasn't responded in 45 seconds. (run:event=1501:13147) Cancelling ... JANA ERROR>> Thread 0 (7fcb4181b700) hasn't responded in 45.5 seconds. (run:event=1501:13147) Cancelling ... JANA ERROR>> Thread 0 (7fcb4181b700) hasn't responded in 46 seconds. (run:event=1501:13147) Cancelling ... JANA ERROR>> Thread 0 (7fcb4181b700) hasn't responded in 46.5 seconds. (run:event=1501:13147) Cancelling ... JANA ERROR>> Thread 0 (7fcb4181b700) hasn't responded in 47 seconds. (run:event=1501:13147) Cancelling ... JANA ERROR>> Thread 0 (7fcb4181b700) hasn't responded in 47.5 seconds. (run:event=1501:13147) Cancelling ... JANA ERROR>> Thread 0 (7fcb4181b700) hasn't responded in 48 seconds. (run:event=1501:13147) Cancelling ... JANA ERROR>> Thread 0 (7fcb4181b700) hasn't responded in 48.5 seconds. (run:event=1501:13147) Cancelling ... JANA ERROR>> Thread 0 (7fcb4181b700) hasn't responded in 49 seconds. (run:event=1501:13147) Cancelling ... JANA ERROR>> Thread 0 (7fcb4181b700) hasn't responded in 49.5 seconds. (run:event=1501:13147) Cancelling ... JANA ERROR>> Thread 0 (7fcb4181b700) hasn't responded in 50 seconds. (run:event=1501:13147) Cancelling ... JANA ERROR>> Thread 0 (7fcb4181b700) hasn't responded in 50.5 seconds. (run:event=1501:13147) Cancelling ... JANA ERROR>> Thread 0 (7fcb4181b700) hasn't responded in 51 seconds. (run:event=1501:13147) Cancelling ... JANA ERROR>> Thread 0 (7fcb4181b700) hasn't responded in 51.5 seconds. (run:event=1501:13147) Cancelling ... JANA ERROR>> Thread 0 (7fcb4181b700) hasn't responded in 52 seconds. (run:event=1501:13147) Cancelling ... JANA ERROR>> Thread 0 (7fcb4181b700) hasn't responded in 52.5 seconds. (run:event=1501:13147) Cancelling ... JANA ERROR>> Thread 0 (7fcb4181b700) hasn't responded in 53 seconds. (run:event=1501:13147) Cancelling ... JANA ERROR>> Thread 0 (7fcb4181b700) hasn't responded in 53.5 seconds. (run:event=1501:13147) Cancelling ... JANA ERROR>> Thread 0 (7fcb4181b700) hasn't responded in 54 seconds. (run:event=1501:13147) Cancelling ... JANA ERROR>> Thread 0 (7fcb4181b700) hasn't responded in 54.5 seconds. (run:event=1501:13147) Cancelling ... JANA ERROR>> Thread 0 (7fcb4181b700) hasn't responded in 55 seconds. (run:event=1501:13147) Cancelling ... JANA ERROR>> Thread 0 (7fcb4181b700) hasn't responded in 55.5 seconds. (run:event=1501:13147) Cancelling ... JANA ERROR>> Caught HUP signal for thread 0x7fcb4181b700 thread exiting... JANA ERROR>> JANA ERROR>> Last thread to lock output file mutex: 0x7fcb4181b700 JANA ERROR>> Attempting to unlock mutex to avoid deadlock. JANA ERROR>> However, the output file is likely corrupt at JANA ERROR>> this point and the process should be restarted ... JANA ERROR>> JANA ERROR>> JANA ERROR>> Automatic relaunching of threads is disabled. If you wish to JANA ERROR>> have the program relaunch a replacement thread when a stalled JANA ERROR>> one is killed, set the JANA:MAX_RELAUNCH_THREADS configuration JANA ERROR>> parameter to a value greater than zero. E.g.: JANA ERROR>> JANA ERROR>> jana -PJANA:MAX_RELAUNCH_THREADS=10 JANA ERROR>> JANA ERROR>> The prograJANA >> m will quit now. JANA >>Telling all threads to quit ... JANA >>Merging thread 0 (0x7fcb4181b700) ... Closed HDDM file 13146 event written to hdgeant_smeared.hddm JANA >>Merging event reader thread ... JANA >> 13097 events processed (13157 events read) Average rate: 76.2Hz Running hd_root with danarest ... JANA >>OUTPUT_FILENAME: hd_root.root JANA >>Initializing plugin "/u/scratch/gluex/nightly/2015-12-10/Linux_CentOS6-x86_64-gcc4.4.7/sim-recon/Linux_CentOS6-x86_64-gcc4.4.7/plugins/danarest.so" ... Opened ROOT file "hd_root.root" ... JANA >>Opening source "hdgeant_smeared.hddm" of type: HDDM JANA >>Launching threads . JANA >>Created JCalibration object of type: JCalibrationCCDB JANA >>Generated via: JCalibration using CCDB for MySQL and SQLite databases JANA >>Run:1501 JANA >>URL: mysql://ccdb_user@hallddb.jlab.org/ccdb JANA >>context: variation=mc JANA >>Creating DGeometry: JANA >> Run requested:1501 found:1501 JANA >> Run validity range: 1501-1501 JANA >> URL="xmlfile:///u/scratch/gluex/nightly/2015-12-10/Linux_CentOS6-x86_64-gcc4.4.7/hdds/main_HDDS.xml" context="default" JANA >> Type="JGeometryXML" JANA >>Found 18 material maps in calib. DB for run 1501 JANA >>Read in 18 material maps containing 62173 grid points total =========================================================== There was a crash. This is the entire stack trace of all threads: =========================================================== Thread 3 (Thread 0x7f237164e700 (LWP 44382)): #0 0x000000362560b5bc in pthread_cond_wait GLIBC_2.3.2 () from /lib64/libpthread.so.0 #1 0x0000000000d39151 in jana::JApplication::EventBufferThread (this=0x7ffffc52dfc0) at src/JANA/JApplication.cc:650 #2 0x0000000000d38d17 in LaunchEventBufferThread (arg=0x7ffffc52dfc0) at src/JANA/JApplication.cc:574 #3 0x00000036256079d1 in start_thread () from /lib64/libpthread.so.0 #4 0x0000003624ae88fd in clone () from /lib64/libc.so.6 Thread 2 (Thread 0x7f236bfff700 (LWP 44383)): #0 0x0000003624aac65d in waitpid () from /lib64/libc.so.6 #1 0x0000003624a3e609 in do_system () from /lib64/libc.so.6 #2 0x0000003624a3e940 in system () from /lib64/libc.so.6 #3 0x00007f2377498298 in TUnixSystem::StackTrace() () from /group/halld/Software/builds/Linux_CentOS6-x86_64-gcc4.4.7/root/root_5.34.26/lib/libCore.so #4 0x00007f2377497113 in TUnixSystem::DispatchSignals(ESignals) () from /group/halld/Software/builds/Linux_CentOS6-x86_64-gcc4.4.7/root/root_5.34.26/lib/libCore.so #5 #6 0x00007f2371728404 in JEventProcessor_danarest::evnt (this=, locEventLoop=0x7f23640008c0, eventnumber=) at plugins/Utilities/danarest/JEventProcessor_danarest.cc:49 #7 0x0000000000d76689 in jana::JEventLoop::OneEvent (this=0x7f23640008c0) at src/JANA/JEventLoop.cc:604 #8 0x0000000000d756ea in jana::JEventLoop::Loop (this=0x7f23640008c0) at src/JANA/JEventLoop.cc:464 #9 0x0000000000d3b6e0 in LaunchThread (arg=0x7ffffc52dfc0) at src/JANA/JApplication.cc:1281 #10 0x00000036256079d1 in start_thread () from /lib64/libpthread.so.0 #11 0x0000003624ae88fd in clone () from /lib64/libc.so.6 Thread 1 (Thread 0x7f237247a1c0 (LWP 44381)): #0 0x000000362560ef3d in nanosleep () from /lib64/libpthread.so.0 #1 0x0000000000d3cb2c in jana::JApplication::Run (this=0x7ffffc52dfc0, proc=0x1e2dd40, Nthreads=1) at src/JANA/JApplication.cc:1504 #2 0x00000000005e9627 in main (narg=5, argv=0x7ffffc52e5e8) at programs/Analysis/hd_root/hd_root.cc:45 =========================================================== The lines below might hint at the cause of the crash. If they do not help you then please submit a bug report at http://root.cern.ch/bugs. Please post the ENTIRE stack trace from above as an attachment in addition to anything else that might help us fixing this issue. =========================================================== #6 0x00007f2371728404 in JEventProcessor_danarest::evnt (this=, locEventLoop=0x7f23640008c0, eventnumber=) at plugins/Utilities/danarest/JEventProcessor_danarest.cc:49 #7 0x0000000000d76689 in jana::JEventLoop::OneEvent (this=0x7f23640008c0) at src/JANA/JEventLoop.cc:604 #8 0x0000000000d756ea in jana::JEventLoop::Loop (this=0x7f23640008c0) at src/JANA/JEventLoop.cc:464 #9 0x0000000000d3b6e0 in LaunchThread (arg=0x7ffffc52dfc0) at src/JANA/JApplication.cc:1281 #10 0x00000036256079d1 in start_thread () from /lib64/libpthread.so.0 #11 0x0000003624ae88fd in clone () from /lib64/libc.so.6 =========================================================== /group/halld/Software/scripts/b1pi_test/b1pi_test.sh: line 111: 44381 Segmentation fault hd_root -PJANA:BATCH_MODE=1 --nthreads=$NTHREADS -PPLUGINS=danarest hdgeant_smeared.hddm Running hd_root with b1pi_hists & monitoring_hists ... JANA >>OUTPUT_FILENAME: hd_root.root JANA >>Initializing plugin "/u/scratch/gluex/nightly/2015-12-10/Linux_CentOS6-x86_64-gcc4.4.7/sim-recon/Linux_CentOS6-x86_64-gcc4.4.7/plugins/b1pi_hists.so" ... JANA >>Initializing plugin "/u/scratch/gluex/nightly/2015-12-10/Linux_CentOS6-x86_64-gcc4.4.7/sim-recon/Linux_CentOS6-x86_64-gcc4.4.7/plugins/monitoring_hists.so" ... Opened ROOT file "hd_root.root" ... JANA ERROR>> JANA ERROR>> xxxxxxxxxxxx Unable to open event source "dana_rest.hddm"! xxxxxxxxxxxx JANA ERROR>> JANA ERROJANA >> JANA >>Telling all threads to quit ... R>> xxxxxxxxxxxx NO VALID EVENT SOURCES GIVEN !!! xxxxxxxxxxxx JANA ERROR>> JANA >>Launching threads . JANA >> JANA >>Telling all threads to quit ... JANA >>Merging event reader thread ... JANA >> 0 events processed (0 events read) Average rate: 0.0Hz Closed ROOT file JANA >>Closing shared object handle 0 ... JANA >>Closing shared object handle 1 ... Create plots ******************************************* * * * W E L C O M E to R O O T * * * * Version 5.34/26 20 February 2015 * * * * You are welcome to visit our Web site * * http://root.cern.ch * * * ******************************************* ROOT 5.34/26 (v5-34-26@v5-34-26, Feb 20 2015, 13:23:25 on linuxx8664gcc) CINT/ROOT C/C++ Interpreter version 5.18.00, July 2, 2010 Type ? for help. Commands must be C++ statements. Enclose multiple statements between { }. Processing mk_pics.C... Error: illegal pointer to class object Part_kin 0x0 1895 mk_pics.C:19: *** Interpreter error recovered *** mkdir: created directory `/group/halld/www/halldweb/html/b1pi/2015-12-10/Linux_CentOS6-x86_64-gcc4.4.7' cp: cannot stat `*.pdf': No such file or directory cp: cannot stat `*.gif': No such file or directory `index.html' -> `/group/halld/www/halldweb/html/b1pi/2015-12-10/Linux_CentOS6-x86_64-gcc4.4.7/index.html'