Pseudo-terminal will not be allocated because stdin is not a terminal. mkdir: created directory `/u/scratch/gluex/b1pi/2014-01-06/Linux_CentOS6-x86_64-gcc4.4.6' `/group/halld/Software/scripts/b1pi_macros/anal1.C' -> `./anal1.C' `/group/halld/Software/scripts/b1pi_macros/b1_pi.C' -> `./b1_pi.C' `/group/halld/Software/scripts/b1pi_macros/b1pi_cron.sh' -> `./b1pi_cron.sh' `/group/halld/Software/scripts/b1pi_macros/b1pi_cron.sh~' -> `./b1pi_cron.sh~' `/group/halld/Software/scripts/b1pi_macros/b1pi.csh' -> `./b1pi.csh' `/group/halld/Software/scripts/b1pi_macros/b1pi_gen.C' -> `./b1pi_gen.C' `/group/halld/Software/scripts/b1pi_macros/b1pi_gen.h' -> `./b1pi_gen.h' `/group/halld/Software/scripts/b1pi_macros/b1_pi.h' -> `./b1_pi.h' `/group/halld/Software/scripts/b1pi_macros/b1pi_message.sh' -> `./b1pi_message.sh' `/group/halld/Software/scripts/b1pi_macros/b1pi_one.csh' -> `./b1pi_one.csh' `/group/halld/Software/scripts/b1pi_macros/b1pi_rec.C' -> `./b1pi_rec.C' `/group/halld/Software/scripts/b1pi_macros/b1pi_rec.h' -> `./b1pi_rec.h' `/group/halld/Software/scripts/b1pi_macros/fit_voigt.C' -> `./fit_voigt.C' `/group/halld/Software/scripts/b1pi_macros/index.html' -> `./index.html' `/group/halld/Software/scripts/b1pi_macros/makeallplots.C' -> `./makeallplots.C' `/group/halld/Software/scripts/b1pi_macros/mass_X.C' -> `./mass_X.C' `/group/halld/Software/scripts/b1pi_macros/mkevents.sh' -> `./mkevents.sh' `/group/halld/Software/scripts/b1pi_macros/mkevents.sh~' -> `./mkevents.sh~' `/group/halld/Software/scripts/b1pi_macros/mk_pics.C' -> `./mk_pics.C' `/group/halld/Software/scripts/b1pi_macros/momentum.C' -> `./momentum.C' `/group/halld/Software/scripts/b1pi_macros/README' -> `./README' `/group/halld/Software/scripts/b1pi_macros/StandardLabels.C' -> `./StandardLabels.C' `/group/halld/Software/scripts/b1pi_macros/theta.C' -> `./theta.C' Copying /group/halld/Software/builds/nightly/2014-01-06/sim-recon/src/programs/Simulation/genr8/InputFiles/b1_pi.input ... Running genr8 ... Maximum number of events: 20000 Opening file b1_pi.ascii for output. Reading: beamp.x beamp.y beamp.z beamMass Found: 0.000000 0.000000 9.000000 0.000000 Reading: targetp.x targetp.y targetp.z targetMass Found: 0.000000 0.000000 0.000000 0.938000 Reading: t-channelSlope Found: 5.000000 Reading: number of particles need to describe the decay Found: 12 Reading: part# chld1# chld2# prnt# Id nchld mass width chrg flag Found: 0 -1 -1 -1 14 0 0.938000 0.000000 1 11 Found: 1 2 3 -1 0 2 2.000000 0.100000 1 0 Found: 2 4 5 1 0 2 1.235000 0.142000 1 0 Found: 3 4 5 1 9 0 0.140000 0.000000 -1 11 Found: 4 6 7 2 0 2 0.783000 0.009000 0 0 Found: 5 6 7 2 8 0 0.140000 0.000000 1 11 Found: 6 8 9 4 0 2 0.776000 0.150000 0 0 Found: 7 10 11 4 7 2 0.135000 0.000000 0 0 Found: 8 10 11 6 8 0 0.140000 0.000000 1 11 Found: 9 10 11 6 9 0 0.140000 0.000000 -1 11 Found: 10 10 11 7 1 0 0.000000 0.000000 0 11 Found: 11 10 11 7 1 0 0.000000 0.000000 0 11 Found EOI---- Input File appears Fine. Calculating Lorentz Factor: 9000 Calculating Lorentz Factor: 8000 Calculating Lorentz Factor: 7000 Calculating Lorentz Factor: 6000 Calculating Lorentz Factor: 5000 Calculating Lorentz Factor: 4000 Calculating Lorentz Factor: 3000 Calculating Lorentz Factor: 2000 Calculating Lorentz Factor: 1000 Calculating Lorentz Factor: 100 Calculating Lorentz Factor: 90 Calculating Lorentz Factor: 80 Calculating Lorentz Factor: 70 Calculating Lorentz Factor: 60 Calculating Lorentz Factor: 50 Calculating Lorentz Factor: 40 Calculating Lorentz Factor: 30 Calculating Lorentz Factor: 20 Calculating Lorentz Factor: 10 Calculating Lorentz Factor: 0 Events generated: 100 Events accepted: 51 Events generated: 200 Events accepted: 101 Events generated: 300 Events accepted: 141 Events generated: 400 Events accepted: 190 Events generated: 500 Events accepted: 239 Events generated: 600 Events accepted: 287 Events generated: 700 Events accepted: 334 Events generated: 800 Events accepted: 377 Events generated: 900 Events accepted: 429 Events generated: 1000 Events accepted: 483 Events generated: 10000 Events accepted: 4737 Events generated: 20000 Events accepted: 9508 Events generated: 30000 Events accepted: 14325 Events generated: 40000 Events accepted: 19147 Max Lorentz Factor:0.001264 Events generated:41814 Events acepted:20000 Setting random number seed to: 1389043907 Converting generated events to HDDM ... Wrote event 1000 Wrote event 2000 Wrote event 3000 Wrote event 4000 Wrote event 5000 Wrote event 6000 Wrote event 7000 Wrote event 8000 Wrote event 9000 Wrote event 10000 Wrote event 11000 Wrote event 12000 Wrote event 13000 Wrote event 14000 Wrote event 15000 Wrote event 16000 Wrote event 17000 Wrote event 18000 Wrote event 19000 Wrote event 20000 Wrote 20000 events to b1_pi.hddm mv: cannot stat `output.hddm': No such file or directory Creating control.in file ... Running hdgeant ... =========================================================== There was a crash. This is the entire stack trace of all threads: =========================================================== #0 0x0000003345eaad7d in waitpid () from /lib64/libc.so.6 #1 0x0000003345e3e329 in do_system () from /lib64/libc.so.6 #2 0x0000003345e3e660 in system () from /lib64/libc.so.6 #3 0x00007fae79114e28 in TUnixSystem::StackTrace() () from /group/halld/Software/ExternalPackages/ROOT/v5.34.01/root_Linux_CentOS6-x86_64-gcc4.4.6/lib/libCore.so #4 0x00007fae79113923 in TUnixSystem::DispatchSignals(ESignals) () from /group/halld/Software/ExternalPackages/ROOT/v5.34.01/root_Linux_CentOS6-x86_64-gcc4.4.6/lib/libCore.so #5 #6 0x0000000000000004 in ?? () #7 0x00007fae7a28fc1f in ccdb::Calibration::GetCalib (this=0x7fff79799b40, values=std::vector of length -35096817988880, capacity -35094690937740 = {...}, namepath=Traceback (most recent call last): header = ptr.cast(reptype) - 1 #8 0x00000000007c9b7c in jana::JCalibrationGeneratorCCDB::MakeJCalibration(std::basic_string, std::allocator >, int, std::basic_string, std::allocator >) () #9 0x00000000007bb005 in jana::JApplication::GetJCalibration(unsigned int) () #10 0x000000000056221a in initcalibdb_ () #11 0x000000000058bfc7 in uginit_ () #12 0x000000000057c68d in hdgeant_ () #13 0x000000000055f104 in main () =========================================================== The lines below might hint at the cause of the crash. If they do not help you then please submit a bug report at http://root.cern.ch/bugs. Please post the ENTIRE stack trace from above as an attachment in addition to anything else that might help us fixing this issue. =========================================================== #6 0x0000000000000004 in ?? () #7 0x00007fae7a28fc1f in ccdb::Calibration::GetCalib (this=0x7fff79799b40, values=std::vector of length -35096817988880, capacity -35094690937740 = {...}, namepath=Traceback (most recent call last): header = ptr.cast(reptype) - 1 #8 0x00000000007c9b7c in jana::JCalibrationGeneratorCCDB::MakeJCalibration(std::basic_string, std::allocator >, int, std::basic_string, std::allocator >) () #9 0x00000000007bb005 in jana::JApplication::GetJCalibration(unsigned int) () #10 0x000000000056221a in initcalibdb_ () #11 0x000000000058bfc7 in uginit_ () #12 0x000000000057c68d in hdgeant_ () #13 0x000000000055f104 in main () =========================================================== !!!Fatal Error: Interpreter memory overwritten by illegal access.!!! !!!Terminate session!!! !!!Fatal Error: Interpreter memory overwritten by illegal access.!!! !!!Terminate session!!! !!!Fatal Error: Interpreter memory overwritten by illegal access.!!! !!!Terminate session!!! !!!Fatal Error: Interpreter memory overwritten by illegal access.!!! !!!Terminate session!!! !!!Fatal Error: Interpreter memory overwritten by illegal access.!!! !!!Terminate session!!! !!!Fatal Error: Interpreter memory overwritten by illegal access.!!! !!!Terminate session!!! !!!Fatal Error: Interpreter memory overwritten by illegal access.!!! !!!Terminate session!!! !!!Fatal Error: Interpreter memory overwritten by illegal access.!!! !!!Terminate session!!! !!!Fatal Error: Interpreter memory overwritten by illegal access.!!! !!!Terminate session!!! !!!Fatal Error: Interpreter memory overwritten by illegal access.!!! !!!Terminate session!!! !!!Fatal Error: Interpreter memory overwritten by illegal access.!!! !!!Terminate session!!! Segmentation fault Running mcsmear ... BCAL values will be smeared BCAL values will be added *** Break *** segmentation violation =========================================================== There was a crash. This is the entire stack trace of all threads: =========================================================== #0 0x0000003345eaad3e in waitpid () from /lib64/libc.so.6 #1 0x0000003345e3e329 in do_system () from /lib64/libc.so.6 #2 0x00007f8011ba5e28 in TUnixSystem::StackTrace() () from /group/halld/Software/ExternalPackages/ROOT/v5.34.01/root_Linux_CentOS6-x86_64-gcc4.4.6/lib/libCore.so #3 0x00007f8011ba4923 in TUnixSystem::DispatchSignals(ESignals) () from /group/halld/Software/ExternalPackages/ROOT/v5.34.01/root_Linux_CentOS6-x86_64-gcc4.4.6/lib/libCore.so #4 #5 0x00007f800cfe0c1d in ccdb::Calibration::GetCalib (this=0x7fffc6381bc0, values=std::vector of length -35046979839016, capacity -35045914672972 = {...}, namepath=Traceback (most recent call last): header = ptr.cast(reptype) - 1 #6 0x000000000059801c in jana::JCalibrationGeneratorCCDB::MakeJCalibration(std::basic_string, std::allocator >, int, std::basic_string, std::allocator >) () #7 0x0000000000589425 in jana::JApplication::GetJCalibration(unsigned int) () #8 0x000000000050ac76 in main () =========================================================== The lines below might hint at the cause of the crash. If they do not help you then please submit a bug report at http://root.cern.ch/bugs. Please post the ENTIRE stack trace from above as an attachment in addition to anything else that might help us fixing this issue. =========================================================== #5 0x00007f800cfe0c1d in ccdb::Calibration::GetCalib (this=0x7fffc6381bc0, values=std::vector of length -35046979839016, capacity -35045914672972 = {...}, namepath=Traceback (most recent call last): header = ptr.cast(reptype) - 1 #6 0x000000000059801c in jana::JCalibrationGeneratorCCDB::MakeJCalibration(std::basic_string, std::allocator >, int, std::basic_string, std::allocator >) () #7 0x0000000000589425 in jana::JApplication::GetJCalibration(unsigned int) () #8 0x000000000050ac76 in main () =========================================================== !!!Fatal Error: Interpreter memory overwritten by illegal access.!!! !!!Terminate session!!! !!!Fatal Error: Interpreter memory overwritten by illegal access.!!! !!!Terminate session!!! !!!Fatal Error: Interpreter memory overwritten by illegal access.!!! !!!Terminate session!!! !!!Fatal Error: Interpreter memory overwritten by illegal access.!!! !!!Terminate session!!! !!!Fatal Error: Interpreter memory overwritten by illegal access.!!! !!!Terminate session!!! !!!Fatal Error: Interpreter memory overwritten by illegal access.!!! !!!Terminate session!!! !!!Fatal Error: Interpreter memory overwritten by illegal access.!!! !!!Terminate session!!! !!!Fatal Error: Interpreter memory overwritten by illegal access.!!! !!!Terminate session!!! !!!Fatal Error: Interpreter memory overwritten by illegal access.!!! !!!Terminate session!!! !!!Fatal Error: Interpreter memory overwritten by illegal access.!!! !!!Terminate session!!! !!!Fatal Error: Interpreter memory overwritten by illegal access.!!! !!!Terminate session!!! Segmentation fault Running hd_root with danarest ... JANA >>OUTPUT_FILENAME: hd_root.root JANA >>Initializing plugin "/group/halld/Software/builds/nightly/2014-01-06/sim-recon/lib/Linux_CentOS6-x86_64-gcc4.4.6/danarest.so" ... Opened ROOT file "hd_root.root" ... JANA >> JANA >>Telling all threads to quit ... JANA ERROR>> JANA ERROR>> xxxxxxxxxxxx Unable to open event source "hdgeant_smeared.hddm"! xxxxxxxxxxxx JANA ERROR>> JANA ERROR>> xxxxxxxxxxxx NO VALID EVENT SOURCES GIVEN !!! xxxxxxxxxxxx JANA ERROR>> JANA >>Launching threads . JANA >> JANA >>Telling all threads to quit ... JANA >>Merging event reader thread ... JANA >> 0 events processed (0 events read) Average rate: 0.0Hz JANA >>Closing shared object handle 0 ... Closed ROOT file Running hd_root with b1pi_hists ... JANA >>OUTPUT_FILENAME: hd_root.root JANA >>Initializing plugin "/group/halld/Software/builds/nightly/2014-01-06/sim-recon/lib/Linux_CentOS6-x86_64-gcc4.4.6/b1pi_hists.so" ... Opened ROOT file "hd_root.root" ... JANA >> JANA >>Telling all threads to quit ... JANA ERROR>> JANA ERROR>> xxxxxxxxxxxx Unable to open event source "dana_rest.hddm"! xxxxxxxxxxxx JANA ERROR>> JANA ERROR>> xxxxxxxxxxxx NO VALID EVENT SOURCES GIVEN !!! xxxxxxxxxxxx JANA ERROR>> JANA >>Launching threads . JANA >> JANA >>Telling all threads to quit ... JANA >>Merging event reader thread ... JANA >> 0 events processed (0 events read) Average rate: 0.0Hz JANA >>Closing shared object handle 0 ... Closed ROOT file Create plots